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Report for CCDS15917.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15917.1 Public Mus musculus 2 Eeig1 23 108 98 CCDS HistoryNCBI Gene:98952Re-query CCDS DB by CCDS ID:15917.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15917.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048375.5 ENSMUSP00000044731.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048375.5Link to Ensembl Protein Viewer:ENSMUSP00000044731.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000048375Re-query CCDS DB by Protein ID:ENSMUSP00000044731
Original member NCBI NM_153560.4 NP_705788.1 Updated not alive Link to Nucleotide Sequence:NM_153560.4Link to Protein Sequence:NP_705788.1Re-query CCDS DB by Nucleotide ID:NM_153560Re-query CCDS DB by Protein ID:NP_705788
Current member NCBI NM_153560.5 NP_705788.1 Accepted alive Link to Nucleotide Sequence:NM_153560.5Link to Protein Sequence:NP_705788.1Re-query CCDS DB by Nucleotide ID:NM_153560Re-query CCDS DB by Protein ID:NP_705788Link to BLAST:NP_705788.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705788.1 392 Q78T81 392 100% 0 0

Chromosomal Locations for CCDS 15917.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 32536087 32536232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32558027 32558147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32558318 32558347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32560039 32560155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32563419 32563465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32563602 32563759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32565401 32565505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32565588 32565804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32566269 32566390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32566488 32566557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32567395 32567440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1179 nt):
ATGGCTTTTTTGATGAAGAAGAAGAAATTTAAATTTCAAACCACTTTCACCTTGGAGGAGCTGACTGCGG
TCCCCTTCGTGAACGGGGTCCTCTTTTGCAAGGTCCGGCTGCTGGATGGCGGGGATTTTGTCAGCTTGTC
GTCCAGGGAGGAGGTGCAGGAGAACTGTGTACGATGGCGGAAGAGGTTCACCTTTGTGTGTAAAATGAGT
GCCAACCCGGCCACAGGCCTGCTGGACCCCTGCATCTTTCGAGTGTCTGTGCGCAAGGAGCTGAAAGGTG
GGAAGGCGTATTCCAAGCTGGGCTTCACTGACTTGAACCTAGCCGAGTTTGCAGGCTCAGGCTCCACCGT
CCGCTGCTGCCTATTGGAAGGATACGACACCAAGAATACCCGCCAGGACAACTCCATCCTCAAGGTCACC
ATTGGCATGTTCCTGCTCTCTGGGGACCCCTGTTTCAAGACGCCACCGTCTACCGCCAAATCCATCTCCA
TCCCGGGCCAGGACTCCTCCCTGCAGCTGACGTGTAAAGGTGGTGGGACCAGCAGCGGTGGCAGCAGCAG
CACCAATTCCCTAACTGGATCCCGGCCCCCCAAGACCCGGCCCACCATCCTGGGCTCAGGACTACCAGAG
GAGCCAGACCAGAGCCTGTCCAGTCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAGCTATG
CCAGCCAGCAGTCCAAGCTATCTGGCTACAGTACAGAGCACTCTCGCTCCTCCAGCCTGTCTGACTTGAC
ACACCGCAGAAATACATCCACCAGCAGCAGCGCCTCTGGTGGCCTCAGTATGGCTGTAGAGGGTCCTGAG
GGCATGGAGAGGGAGCATCGGCCCTCTGAGAAGCCACCTCGGCCTCCTGAGAAGCCCCCACGCCCCCCAC
GCCCCTTGCATCTATCAGATCGCTCTTTTCGGCGAAAGAAAGACTCTGTGGAGAGCCACCCAACCTGGGT
AGATGACACTCGAATTGATGCAGACGACATTGTGGAGAAGATAATGCAGAGCCAGGACTTCACTGATGGC
AGCAACACTGAGGACAGTAACCTTCGGCTGTTCGTGAGCCGTGATGGCTCCACCACACTGAGCGGCATTC
AGCTGGGCAACAGAGTCTCCTCGGGAGTCTACGAGCCAGTCGTAATTGAGAGCCACTGA

Translation (392 aa):
MAFLMKKKKFKFQTTFTLEELTAVPFVNGVLFCKVRLLDGGDFVSLSSREEVQENCVRWRKRFTFVCKMS
ANPATGLLDPCIFRVSVRKELKGGKAYSKLGFTDLNLAEFAGSGSTVRCCLLEGYDTKNTRQDNSILKVT
IGMFLLSGDPCFKTPPSTAKSISIPGQDSSLQLTCKGGGTSSGGSSSTNSLTGSRPPKTRPTILGSGLPE
EPDQSLSSPEEVFHSGHSRNSSYASQQSKLSGYSTEHSRSSSLSDLTHRRNTSTSSSASGGLSMAVEGPE
GMEREHRPSEKPPRPPEKPPRPPRPLHLSDRSFRRKKDSVESHPTWVDDTRIDADDIVEKIMQSQDFTDG
SNTEDSNLRLFVSRDGSTTLSGIQLGNRVSSGVYEPVVIESH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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