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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS41787.2 (previous version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
41787.2 |
Public |
Homo sapiens |
12 |
KRT4 |
22 |
109 |
92 |
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Public Note for CCDS 41787.1 |
The coding region has been updated to shorten the N-terminus to one that is more supported by the available transcript and conservation data. |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Sequence IDs included in CCDS 41787.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000551956.1 |
ENSP00000448220.1 |
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Accepted |
alive |
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NCBI |
NM_002272.3 |
NP_002263.3 |
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Updated |
not alive |
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NCBI |
NM_002272.4 |
NP_002263.3 |
MANE Select |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_002263.3 |
520 |
P19013 |
520 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 41787.2
Assembly GRCh38.p12 (GCF_000001405.38)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1563 nt): ATGATTGCCAGACAGCAGTGTGTCCGAGGCGGGCCCCGGGGCTTCAGCTGTGGCTCGGCCATTGTAGGCG GTGGCAAGAGAGGTGCCTTCAGCTCAGTCTCCATGTCTGGAGGTGCTGGCCGATGCTCTTCTGGGGGATT TGGCAGCAGAAGCCTCTACAACCTCAGGGGGAACAAAAGCATCTCCATGAGTGTGGCTGGGTCACGACAA GGTGCCTGCTTTGGGGGTGCTGGAGGCTTTGGCACTGGTGGCTTTGGTGGTGGATTTGGGGGCTCCTTCA GTGGTAAGGGTGGCCCTGGCTTCCCCGTCTGCCCCGCTGGGGGAATTCAGGAGGTCACCATCAACCAGAG CTTGCTCACCCCCCTCCACGTGGAGATTGACCCTGAGATCCAGAAAGTCCGGACGGAAGAGCGCGAACAG ATCAAGCTCCTCAACAACAAGTTTGCCTCCTTCATCGACAAGGTGCAGTTCTTAGAGCAACAGAATAAGG TCCTGGAGACCAAATGGAACCTGCTCCAGCAGCAGACGACCACCACCTCCAGCAAAAACCTTGAGCCCCT CTTTGAGACCTACCTCAGTGTCCTGAGGAAGCAGCTAGATACCTTGGGCAATGACAAAGGGCGCCTGCAG TCTGAGCTGAAGACCATGCAGGACAGCGTGGAGGACTTCAAGACTAAGTATGAAGAGGAGATCAACAAAC GCACAGCAGCCGAGAATGACTTTGTGGTCCTAAAGAAGGACGTGGATGCTGCCTACCTGAACAAGGTGGA GTTGGAGGCCAAGGTGGACAGTCTTAATGACGAGATCAACTTCCTGAAGGTCCTCTATGATGCGGAGCTG TCCCAGATGCAGACCCATGTCAGCGACACGTCCGTGGTCCTTTCCATGGACAACAACCGCAACCTGGACC TGGACAGCATTATTGCCGAGGTCCGTGCCCAGTACGAGGAGATTGCCCAGAGGAGCAAGGCTGAGGCTGA AGCCCTGTACCAGACCAAGGTCCAGCAGCTCCAGATCTCGGTTGACCAACATGGTGACAACCTGAAGAAC ACCAAGAGTGAAATTGCAGAGCTCAACAGGATGATCCAGAGGCTGCGGGCAGAGATCGAGAACATCAAGA AGCAGTGCCAGACTCTTCAGGTATCCGTGGCTGATGCAGAGCAGCGAGGTGAGAATGCCCTTAAAGATGC CCACAGCAAGCGCGTAGAGCTGGAGGCTGCCCTGCAGCAGGCCAAGGAGGAGCTGGCACGAATGCTGCGT GAGTACCAGGAGCTCATGAGTGTGAAGCTGGCCTTGGACATCGAGATCGCCACCTACCGCAAACTGCTGG AGGGCGAGGAGTACAGAATGTCTGGAGAATGCCAGAGTGCCGTGAGCATCTCTGTGGTCAGCGGTAGCAC CAGCACTGGAGGCATCAGCGGAGGATTAGGAAGTGGCTCCGGGTTTGGCCTGAGTAGTGGCTTTGGCTCC GGCTCTGGAAGTGGCTTTGGGTTTGGTGGCAGTGTCTCTGGCAGTTCCAGCAGCAAGATCATCTCTACCA CCACCCTGAACAAGAGACGATAG
Translation (520 aa): MIARQQCVRGGPRGFSCGSAIVGGGKRGAFSSVSMSGGAGRCSSGGFGSRSLYNLRGNKSISMSVAGSRQ GACFGGAGGFGTGGFGGGFGGSFSGKGGPGFPVCPAGGIQEVTINQSLLTPLHVEIDPEIQKVRTEEREQ IKLLNNKFASFIDKVQFLEQQNKVLETKWNLLQQQTTTTSSKNLEPLFETYLSVLRKQLDTLGNDKGRLQ SELKTMQDSVEDFKTKYEEEINKRTAAENDFVVLKKDVDAAYLNKVELEAKVDSLNDEINFLKVLYDAEL SQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVRAQYEEIAQRSKAEAEALYQTKVQQLQISVDQHGDNLKN TKSEIAELNRMIQRLRAEIENIKKQCQTLQVSVADAEQRGENALKDAHSKRVELEAALQQAKEELARMLR EYQELMSVKLALDIEIATYRKLLEGEEYRMSGECQSAVSISVVSGSTSTGGISGGLGSGSGFGLSSGFGS GSGSGFGFGGSVSGSSSSKIISTTTLNKRR
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