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Report for CCDS27673.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27673.1 Public Mus musculus 15 Tob2 23 108 98 CCDS HistoryNCBI Gene:57259Re-query CCDS DB by CCDS ID:27673.1Re-query CCDS DB by GeneID:57259See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27673.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050467.8 ENSMUSP00000061390.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050467.8Link to Ensembl Protein Viewer:ENSMUSP00000061390.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000050467Re-query CCDS DB by Protein ID:ENSMUSP00000061390
Original member Current member NCBI NM_020507.3 NP_065253.1 Accepted alive Link to Nucleotide Sequence:NM_020507.3Link to Protein Sequence:NP_065253.1Re-query CCDS DB by Nucleotide ID:NM_020507Re-query CCDS DB by Protein ID:NP_065253Link to BLAST:NP_065253.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065253.1 345 Q9JM55 345 100% 0 0

Chromosomal Locations for CCDS 27673.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 81850729 81851766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGCAGCTGGAGATCAAAGTGGCCCTCAACTTCATCATCTCCTACTTATACAACAAGCTGCCCCGCCGCA
GG
GCAGACCTGTTTGGGGAGGAGCTAGAGCGGCTTCTGAGAAAGAAATATGAGGGCCACTGGTACCCGGA
G
AAGCCGTTGAAGGGTTCTGGCTTCCGCTGTGTCCACATTGGGGAAGTGGTAGACCCTGTGGTGGAGCTG
GCT
GCCAAGCGGAGCGGCCTAGCTGTGGAGGATGTGCGTGCCAACGTGCCCGAAGAGCTGAGTGTCTGGA
TT
GACCCTTTCGAGGTATCCTACCAGATTGGCGAGAAGGGAGTCGTGAAGGTCCTGTACCTGGGTGACAG
T
GAGGCGAGTGGTACCCCAGAGCTGGACAAAGAGATCAAGAGCAGCTTCAACCCTGACGCCCAGGTGTTT
GTG
CCCATCGGCAGCCAGGACAGCTCTCTGTCCAGCTCTCCCTCGCCGTCCTTTGGCCAGTCACCCAGCC
CC
ACCTTCATCCCCCGGTCTGCCCAGCCCATCACCTTTACTACTGCCTCTTTTGCTGCCACCAAATTTGG
T
TCCACTAAGATGAAGAAGGGTGGTGGGGCATCTGGCGGTGTGAGTGTGGGTGGCAGCGGGGCGGGTGGC
CAG
CAGCCGCCGCCACAGCAGCCTCGCATGGCCCGCTCACCCACAAAGAACCTGCTGAAGCACAAGAGCC
TC
TCTCTATCTATGCATTCACTGAACCTCATCCCAGCCAATCCGGCCCCCCAGTCCCAGCTCTCCCCCAA
T
GCCAAGGAGTTTGTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGC
ACC
AGCACCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTGATGTGTCCC
AG
GTGTTCGGAGGCGGTGCTAACAGCCTGTTCTTGGAGAAATCGCCCTTTGTGGAAGGCCTCAGCTACAA
C
CTGAATACCATGCAGTATCCCAACCAGCCCTTCCAGCCTGTCGTGCTGGCCAACTGA


Translation (345 aa):
MQLEIKVALNFIISYLYNKLPRRRADLFGEELERLLRKKYEGHWYPEKPLKGSGFRCVHIGEVVDPVVEL
A
AKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGVVKVLYLGDSEASGTPELDKEIKSSFNPDAQVF
V
PIGSQDSSLSSSPSPSFGQSPSPTFIPRSAQPITFTTASFAATKFGSTKMKKGGGASGGVSVGGSGAGG
Q
QPPPQQPRMARSPTKNLLKHKSLSLSMHSLNLIPANPAPQSQLSPNAKEFVYNGGGSPSLFFDGVEGPS
T
STTAPFGSGGASTCNSSSFDVSQVFGGGANSLFLEKSPFVEGLSYNLNTMQYPNQPFQPVVLAN




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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