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Report for CCDS17201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17201.1 Public Mus musculus 2 Eef1a2 23 108 98 CCDS HistoryNCBI Gene:13628Re-query CCDS DB by CCDS ID:17201.1Re-query CCDS DB by GeneID:13628See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17201.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055990.7 ENSMUSP00000054556.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055990.7Link to Ensembl Protein Viewer:ENSMUSP00000054556.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000055990Re-query CCDS DB by Protein ID:ENSMUSP00000054556
Original member Current member NCBI NM_007906.3 NP_031932.1 Accepted alive Link to Nucleotide Sequence:NM_007906.3Link to Protein Sequence:NP_031932.1Re-query CCDS DB by Nucleotide ID:NM_007906Re-query CCDS DB by Protein ID:NP_031932Link to BLAST:NP_031932.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031932.1 463 P62631 463 100% 0 0

Chromosomal Locations for CCDS 17201.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 181147979 181148106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181148598 181148832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181149676 181149932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181150919 181151069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181152784 181153080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181153651 181153830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181155263 181155406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGGGCAAGGAGAAGACACACATCAACATTGTGGTCATTGGCCACGTGGACTCAGGCAAGTCCACCACGA
CAGGCCACCTCATCTACAAGTGTGGTGGCATCGACAAGCGGACCATCGAGAAGTTTGAGAAGGAGGCAGC
AGAGATGGGGAAGGGCTCTTTTAAATATGCCTGGGTGCTGGACAAGCTGAAGGCCGAGCGGGAACGAGGC
ATCACCATCGACATCTCCCTCTGGAAGTTTGAGACCACCAAGTACTACATCACCATCATCGATGCTCCAG
GACACCGAGACTTCATCAAGAATATGATTACAGGCACATCCCAGGCGGACTGCGCAGTGCTGATCGTGGC
AGCCGGTGTGGGCGAGTTTGAGGCGGGCATCTCCAAGAACGGGCAAACCCGGGAACACGCACTCCTGGCC
TACACTCTGGGTGTGAAGCAGCTCATTGTGGGTGTCAACAAGATGGACTCCACGGAACCAGCCTACAGCG
AGAAGCGCTATGATGAGATTGTTAAGGAGGTCAGCGCCTACATCAAGAAGATCGGCTACAACCCAGCCAC
GGTGCCCTTCGTGCCCATCTCGGGCTGGCATGGTGACAACATGCTGGAGCCTTCACCTAATATGCCATGG
TTCAAGGGCTGGAAAGTAGAGCGTAAGGAAGGAAATGCAAGCGGCGTGTCCCTGCTGGAAGCCCTGGACA
CAATCCTGCCCCCCACCCGCCCCACTGACAAGCCCCTTCGTCTGCCTCTGCAGGATGTGTACAAGATTGG
GGGCATTGGGACCGTGCCTGTGGGCCGAGTGGAGACCGGTATCCTCCGGCCTGGTATGGTGGTGACCTTT
GCGCCAGTCAACATCACCACAGAGGTGAAGTCTGTGGAAATGCACCATGAGGCACTTAGCGAGGCCCTGC
CTGGTGACAATGTCGGGTTCAATGTGAAGAATGTGTCCGTTAAGGATATTCGCCGGGGCAATGTCTGCGG
GGACAGCAAAGCTGACCCGCCTCAGGAGGCTGCCCAGTTCACCTCTCAGGTTATCATCCTGAACCACCCT
GGGCAAATCAGCGCTGGCTACTCGCCAGTCATCGACTGTCACACGGCCCACATTGCCTGCAAGTTTGCCG
AGCTAAAGGAGAAGATTGACCGTCGTTCTGGCAAGAAGCTGGAGGATAACCCCAAGTCCCTGAAGTCTGG
TGATGCAGCCATTGTTGAGATGGTCCCTGGAAAACCCATGTGTGTGGAGAGCTTCTCACAGTACCCACCT
CTCGGCCGCTTCGCCGTGCGCGACATGCGGCAGACTGTGGCCGTGGGCGTCATCAAGAACGTGGAGAAGA
AGAGCGGCGGCGCAGGCAAGGTCACCAAGTCCGCACAGAAGGCTCAGAAAGCGGGCAAGTGA

Translation (463 aa):
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERG
ITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLA
YTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPW
FKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTF
APVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHP
GQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQKAQKAGK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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