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Report for CCDS14586.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14586.1 Public Homo sapiens X RPL39 24 110 108 CCDS HistoryNCBI Gene:6170Re-query CCDS DB by CCDS ID:14586.1Re-query CCDS DB by GeneID:6170See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14586.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361575.4 ENSP00000355315.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361575.4Link to Ensembl Protein Viewer:ENSP00000355315.3Re-query CCDS DB by Nucleotide ID:ENST00000361575Re-query CCDS DB by Protein ID:ENSP00000355315
Original member Current member NCBI NM_001000.4 NP_000991.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001000.4Link to Protein Sequence:NP_000991.1Re-query CCDS DB by Nucleotide ID:NM_001000Re-query CCDS DB by Protein ID:NP_000991Link to BLAST:NP_000991.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000991.1 51 P62891 51 100% 0 0

Chromosomal Locations for CCDS 14586.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 119786684 119786732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119789908 119790011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119791574 119791576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (156 nt):
ATGTCTTCTCACAAGACTTTCAGGATTAAGCGATTCCTGGCCAAGAAACAAAAGCAAAATCGTCCCATTC
CCCAGTGGATTCGGATGAAAACTGGAAATAAAATCAGGTACAACTCCAAAAGGAGACATTGGAGAAGAAC
CAAGCTGGGTCTATAA

Translation (51 aa):
MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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