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Report for CCDS6711.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6711.1 Public Homo sapiens 9 FBP2 24 110 108 CCDS HistoryNCBI Gene:8789Re-query CCDS DB by CCDS ID:6711.1Re-query CCDS DB by GeneID:8789See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6711.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375337.4 ENSP00000364486.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375337.4Link to Ensembl Protein Viewer:ENSP00000364486.3Re-query CCDS DB by Nucleotide ID:ENST00000375337Re-query CCDS DB by Protein ID:ENSP00000364486
Original member Current member NCBI NM_003837.4 NP_003828.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003837.4Link to Protein Sequence:NP_003828.2Re-query CCDS DB by Nucleotide ID:NM_003837Re-query CCDS DB by Protein ID:NP_003828Link to BLAST:NP_003828.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003828.2 339 O00757 339 100% 0 0

Chromosomal Locations for CCDS 6711.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 94558938 94559132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94563342 94563461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94567270 94567407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94571462 94571602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94584577 94584669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94587307 94587469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94593557 94593726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1020 nt):
ATGACGGACAGAAGCCCCTTCGAAACCGACATGCTCACCCTGACCCGCTACGTTATGGAAAAGGGGCGTC
AGGCCAAAGGGACTGGGGAGCTCACCCAGCTGCTGAACTCAATGCTGACGGCCATCAAAGCCATCTCCTC
GGCTGTGCGCAAGGCCGGTCTGGCCCACCTGTATGGAATCGCAGGAAGCGTTAACGTGACGGGAGATGAG
GTGAAGAAACTGGATGTGCTATCCAATTCCCTGGTGATCAACATGGTCCAATCCTCCTATAGTACCTGCG
TCCTGGTCTCAGAAGAGAATAAGGACGCCATCATCACCGCCAAGGAGAAGCGGGGGAAATACGTGGTCTG
CTTTGACCCACTGGATGGATCTTCCAATATTGACTGCCTGGCCTCCATCGGAACCATCTTTGCCATCTAT
AGAAAGACCTCAGAGGATGAGCCTTCTGAAAAGGATGCCCTGCAGTGTGGCCGCAATATTGTGGCCGCAG
GTTATGCGCTGTACGGTAGTGCAACCCTGGTGGCTCTCTCCACAGGGCAAGGCGTGGACCTCTTCATGCT
TGACCCGGCTCTTGGTGAATTTGTCCTGGTGGAAAAAGATGTCAAGATTAAGAAGAAAGGAAAGATTTAC
AGCCTGAATGAGGGCTATGCCAAGTATTTTGATGCGGCCACCACTGAATATGTGCAGAAAAAGAAATTCC
CTGAGGATGGCAGTGCTCCCTATGGGGCCAGGTATGTGGGCTCCATGGTGGCTGACGTGCACCGCACCCT
GGTCTATGGAGGAATCTTCCTGTACCCAGCCAACCAGAAGAGCCCTAAGGGCAAGCTCCGGCTCCTGTAT
GAATGCAATCCCGTGGCCTACATCATTGAGCAGGCAGGAGGCTTGGCGACCACGGGGACCCAGCCTGTAC
TGGACGTGAAGCCCGAGGCAATTCACCAGCGAGTCCCCCTCATTCTGGGGTCACCAGAGGATGTGCAGGA
ATATCTCACCTGTGTGCAGAAAAATCAGGCAGGCAGCTAG

Translation (339 aa):
MTDRSPFETDMLTLTRYVMEKGRQAKGTGELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGSVNVTGDE
VKKLDVLSNSLVINMVQSSYSTCVLVSEENKDAIITAKEKRGKYVVCFDPLDGSSNIDCLASIGTIFAIY
RKTSEDEPSEKDALQCGRNIVAAGYALYGSATLVALSTGQGVDLFMLDPALGEFVLVEKDVKIKKKGKIY
SLNEGYAKYFDAATTEYVQKKKFPEDGSAPYGARYVGSMVADVHRTLVYGGIFLYPANQKSPKGKLRLLY
ECNPVAYIIEQAGGLATTGTQPVLDVKPEAIHQRVPLILGSPEDVQEYLTCVQKNQAGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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