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Report for CCDS57446.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57446.1 Public Mus musculus 6 Tmem121b 23 108 98 CCDS HistoryNCBI Gene:94047Re-query CCDS DB by CCDS ID:57446.1Re-query CCDS DB by GeneID:94047See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57446.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000178687.1 ENSMUSP00000135924.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178687.1Link to Ensembl Protein Viewer:ENSMUSP00000135924.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178687Re-query CCDS DB by Protein ID:ENSMUSP00000135924
Original member Current member NCBI NM_033567.2 NP_291045.1 Accepted alive Link to Nucleotide Sequence:NM_033567.2Link to Protein Sequence:NP_291045.1Re-query CCDS DB by Nucleotide ID:NM_033567Re-query CCDS DB by Protein ID:NP_291045Link to BLAST:NP_291045.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_291045.1 572 Q99MX7 572 100% 0 0

Chromosomal Locations for CCDS 57446.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 120492036 120493754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGCACCCGGCGCTGGGCCACCCTCGCGCGCTCTCGTCCGCGCCCGCCTCCTTTCCGCCGCCCCCCGCCG
CA
GCCCGGCTACAGCCCCTCTTCCTCCGGGGGGGCTCCTCCCGCGGCCGGAGAGGCTCGGGCGACAGCAG
C
ACCAGCACCAGCACCAGCCGCGGGGGGTGCGGCGGCAGACGCGGCGGAGGCGGCGGCTCCCCGAGCAGC
AGC
ACAGGCGCGGAGCGAGAGGACGACGACGAGAGCATTAGCATCAGCAAGCCACTGGTGCCCGCCGCCG
CC
GCGCTCCCCGGGCCCCCAGCTCAGGGGGGCGTCCCAGTCTCCGCCACCGCGCCCGCCGCCGCCTCCTC
C
ACTTCCACGCCCACCTCTTCCTGCAGCATGACCGCCGCGGACTTCGGCGCGGGCGCCGCGGCCGGCACC
GTC
GGGGGCCCCGGGAGCCGCTCGGCGGTGGGCGCAGGCGGCACCGGGACCGGCGGCGCCGCCTCCTGCT
GC
TCGTGCTGCTGTTGCTGCTGCGGCCGCCCCACTCGCTCCGGCCGTAGGGGTCGGCGCCGGGGCTGCTC
G
CCAAGCCCCGGCTGCCGCTGGGGCTACCAGGCGCTGTCTGTGGTGCTGCTGCTGGCGCAGGGCGGTCTG
CTG
GACCTGTACCTCATTGCAGTCACTGACCTGTACTGGTGCTCTTGGATCGCCACCGACCTCGTGGTGG
TG
GTGGGCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCGTCGGGGCGGCCCAGCGAACAGCATGCA
C
AACCACCACCAGCTCCACCACCACTCGGCTCCGCCTCTGCACCTATCCGCAGCGGCGTCGGCGGGGGCC
GGG
GCCAAGGCTCGCGGGGGCCGAGGAGGTTCTGGAGGCTCCGGAGCCGGGCCGGGGACGACTGGGGCAG
CG
GGCGAGTTCGCTTTTGCGTACCTGGCCTGGCTCATCTACTCCATCGCTTTCACCCCTAAGGTGGTGCT
C
ATCCTGGGCACATCCATCCTGGACCTCATCGAGCTGCGCGCGCCCTTTGGCACCACGGGCTTTCGCCTT
ACC
ATGGCGCTGTCCGTGCCGCTGCTCTACAGCCTAGTGCGTGCCATTAGCGAGGCGGGCGCGCCCCCGG
GC
TCGGCGGGTCCCCTGCTCCTGCAGCCACAGCAGCATCGCGCCGCGGGCTGCTTCCTGGGCACGTGTCT
G
GACCTGCTGGACAGCTTTACACTGGTGGAGCTGATGCTGGACGGCCGCGTGCCGCTTCCGGCGCACCTG
CGC
TACCTGCTCATCGCCGTCTACTTCCTCACTCTTGCCTCCCCAGTGCTCTGGCTGTACGAGCTGAACA
CT
GCCACAGCAGCTCCGTCCTGGGGTCAGACCTCCGGGCCCGGAAGCTGCAGCCGCCTTTTACGTTTGCT
G
GGCGGCTGCCTGGTGGACGTGCCCTTGCTGGCGCTGCGCAGCCTCCTGGTCGTGAGCTACCAACAGCCG
CTG
TCCATCTTTATGCTCAAGAATCTCTTTTTCCTTGGCTGCCGTGGCCTGGAGGCCTTGGAGGGCTGCT
GG
GACCGGGGGAGTTGGGTATCCCCAAGTCGGGCCAGAAGCAGCTATGGTGCTCCTCCCTCTGCCCCTCC
C
CCACCTCCACCACCACCACCTCAGGGAGGCTCCCAGCGGGGCCACTTGGAAAATGAAGGGGGCCCTCAT
GGC
TATGTCAACACTCTAGCTGTTGCCTCTCAGAATTGA


Translation (572 aa):
MHPALGHPRALSSAPASFPPPPAAARLQPLFLRGGSSRGRRGSGDSSTSTSTSRGGCGGRRGGGGGSPSS
S
TGAEREDDDESISISKPLVPAAAALPGPPAQGGVPVSATAPAAASSTSTPTSSCSMTAADFGAGAAAGT
V
GGPGSRSAVGAGGTGTGGAASCCSCCCCCCGRPTRSGRRGRRRGCSPSPGCRWGYQALSVVLLLAQGGL
L
DLYLIAVTDLYWCSWIATDLVVVVGWAIFFAKNSRGRRGGPANSMHNHHQLHHHSAPPLHLSAAASAGA
G
AKARGGRGGSGGSGAGPGTTGAAGEFAFAYLAWLIYSIAFTPKVVLILGTSILDLIELRAPFGTTGFRL
T
MALSVPLLYSLVRAISEAGAPPGSAGPLLLQPQQHRAAGCFLGTCLDLLDSFTLVELMLDGRVPLPAHL
R
YLLIAVYFLTLASPVLWLYELNTATAAPSWGQTSGPGSCSRLLRLLGGCLVDVPLLALRSLLVVSYQQP
L
SIFMLKNLFFLGCRGLEALEGCWDRGSWVSPSRARSSYGAPPSAPPPPPPPPPQGGSQRGHLENEGGPH
G
YVNTLAVASQN




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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