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Report for CCDS7639.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7639.1 Public Homo sapiens 10 OAT 24 110 108 CCDS HistoryNCBI Gene:4942Re-query CCDS DB by CCDS ID:7639.1Re-query CCDS DB by GeneID:4942See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7639.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368845.6 ENSP00000357838.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368845.6Link to Ensembl Protein Viewer:ENSP00000357838.5Re-query CCDS DB by Nucleotide ID:ENST00000368845Re-query CCDS DB by Protein ID:ENSP00000357838
Original member Current member NCBI NM_000274.4 NP_000265.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000274.4Link to Protein Sequence:NP_000265.1Re-query CCDS DB by Nucleotide ID:NM_000274Re-query CCDS DB by Protein ID:NP_000265Link to BLAST:NP_000265.1
Original member Current member NCBI NM_001322965.2 NP_001309894.1 Accepted alive Link to Nucleotide Sequence:NM_001322965.2Link to Protein Sequence:NP_001309894.1Re-query CCDS DB by Nucleotide ID:NM_001322965Re-query CCDS DB by Protein ID:NP_001309894Link to BLAST:NP_001309894.1
Original member Current member NCBI NM_001322966.2 NP_001309895.1 Accepted alive Link to Nucleotide Sequence:NM_001322966.2Link to Protein Sequence:NP_001309895.1Re-query CCDS DB by Nucleotide ID:NM_001322966Re-query CCDS DB by Protein ID:NP_001309895Link to BLAST:NP_001309895.1
Original member Current member NCBI NM_001322967.2 NP_001309896.1 Accepted alive Link to Nucleotide Sequence:NM_001322967.2Link to Protein Sequence:NP_001309896.1Re-query CCDS DB by Nucleotide ID:NM_001322967Re-query CCDS DB by Protein ID:NP_001309896Link to BLAST:NP_001309896.1
Original member Current member NCBI NM_001322968.2 NP_001309897.1 Accepted alive Link to Nucleotide Sequence:NM_001322968.2Link to Protein Sequence:NP_001309897.1Re-query CCDS DB by Nucleotide ID:NM_001322968Re-query CCDS DB by Protein ID:NP_001309897Link to BLAST:NP_001309897.1
Original member Current member NCBI NM_001322969.2 NP_001309898.1 Accepted alive Link to Nucleotide Sequence:NM_001322969.2Link to Protein Sequence:NP_001309898.1Re-query CCDS DB by Nucleotide ID:NM_001322969Re-query CCDS DB by Protein ID:NP_001309898Link to BLAST:NP_001309898.1
Original member Current member NCBI NM_001322970.2 NP_001309899.1 Accepted alive Link to Nucleotide Sequence:NM_001322970.2Link to Protein Sequence:NP_001309899.1Re-query CCDS DB by Nucleotide ID:NM_001322970Re-query CCDS DB by Protein ID:NP_001309899Link to BLAST:NP_001309899.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000265.1 439 P04181-1 439 100% 0 0
NP_001309894.1 439 P04181-1 439 100% 0 0
NP_001309895.1 439 P04181-1 439 100% 0 0
NP_001309896.1 439 P04181-1 439 100% 0 0
NP_001309897.1 439 P04181-1 439 100% 0 0
NP_001309898.1 439 P04181-1 439 100% 0 0
NP_001309899.1 439 P04181-1 439 100% 0 0

Chromosomal Locations for CCDS 7639.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 124397942 124398102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124400840 124400984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124401726 124401839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124402927 124403055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124403798 124403920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124405436 124405563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124408542 124408637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124408741 124408965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124411973 124412171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGTTTTCCAAACTAGCACATTTGCAGAGGTTTGCTGTACTTAGTCGCGGAGTTCATTCTTCAGTGGCTT
CTGCTACATCTGTTGCAACTAAAAAAACAGTCCAAGGCCCTCCAACCTCTGATGACATTTTTGAAAGGGA
ATATAAGTATGGTGCACACAACTACCATCCTTTACCTGTAGCCCTGGAGAGAGGAAAAGGTATTTACTTA
TGGGATGTAGAAGGCAGAAAATATTTTGACTTCCTGAGTTCTTACAGTGCTGTCAACCAAGGGCATTGTC
ACCCCAAGATTGTGAATGCTCTGAAGAGTCAAGTGGACAAATTGACCTTAACATCTAGAGCTTTCTATAA
TAACGTACTTGGTGAATATGAGGAGTATATTACTAAACTTTTCAACTACCACAAAGTTCTTCCTATGAAT
ACAGGAGTGGAGGCTGGAGAGACTGCCTGTAAACTAGCTCGTAAGTGGGGCTATACCGTGAAGGGCATTC
AGAAATACAAAGCAAAGATTGTTTTTGCAGCTGGGAACTTCTGGGGTAGGACGTTGTCTGCTATCTCCAG
TTCCACAGACCCAACCAGTTACGATGGTTTTGGACCATTTATGCCGGGATTCGACATCATTCCCTATAAT
GATCTGCCCGCACTGGAGCGTGCTCTTCAGGATCCAAATGTGGCTGCGTTCATGGTAGAACCAATTCAGG
GTGAAGCAGGCGTTGTTGTTCCGGATCCAGGTTACCTAATGGGAGTGCGAGAGCTCTGCACCAGGCACCA
GGTTCTCTTTATTGCTGATGAAATACAGACAGGATTGGCCAGAACTGGTAGATGGCTGGCTGTTGATTAT
GAAAATGTCAGACCTGATATAGTCCTCCTTGGAAAGGCCCTTTCTGGGGGCTTATACCCTGTGTCTGCAG
TGCTGTGTGATGATGACATCATGCTGACCATTAAGCCAGGGGAGCATGGGTCCACATACGGTGGCAATCC
ACTAGGCTGCCGAGTGGCCATCGCAGCCCTTGAGGTTTTAGAAGAAGAAAACCTTGCTGAAAATGCAGAC
AAATTGGGCATTATCTTGAGAAATGAACTCATGAAGCTACCTTCTGATGTTGTAACTGCCGTAAGAGGAA
AAGGATTATTAAACGCTATTGTCATTAAAGAAACCAAAGATTGGGATGCTTGGAAGGTGTGTCTACGACT
TCGAGATAATGGACTTCTGGCCAAGCCAACCCATGGCGACATTATCAGGTTTGCGCCTCCGCTGGTGATC
AAGGAGGATGAGCTTCGAGAGTCCATTGAAATTATTAACAAGACCATCTTGTCTTTCTGA

Translation (439 aa):
MFSKLAHLQRFAVLSRGVHSSVASATSVATKKTVQGPPTSDDIFEREYKYGAHNYHPLPVALERGKGIYL
WDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNYHKVLPMN
TGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN
DLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDY
ENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENAD
KLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVI
KEDELRESIEIINKTILSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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