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Report for CCDS32177.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32177.1 Public Homo sapiens 15 UBE3A 24 110 108 CCDS HistoryNCBI Gene:7337Re-query CCDS DB by CCDS ID:32177.1Re-query CCDS DB by GeneID:7337See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32177.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428984.6 ENSP00000401265.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428984.6Link to Ensembl Protein Viewer:ENSP00000401265.2Re-query CCDS DB by Nucleotide ID:ENST00000428984Re-query CCDS DB by Protein ID:ENSP00000401265
Original member Current member EBI ENST00000438097.6 ENSP00000411258.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000438097.6Link to Ensembl Protein Viewer:ENSP00000411258.1Re-query CCDS DB by Nucleotide ID:ENST00000438097Re-query CCDS DB by Protein ID:ENSP00000411258
Original member Current member EBI ENST00000566215.5 ENSP00000457771.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566215.5Link to Ensembl Protein Viewer:ENSP00000457771.1Re-query CCDS DB by Nucleotide ID:ENST00000566215Re-query CCDS DB by Protein ID:ENSP00000457771
Original member Current member EBI ENST00000630424.2 ENSP00000486349.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000630424.2Link to Ensembl Protein Viewer:ENSP00000486349.1Re-query CCDS DB by Nucleotide ID:ENST00000630424Re-query CCDS DB by Protein ID:ENSP00000486349
Original member Current member EBI ENST00000638155.1 ENSP00000490557.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000638155.1Link to Ensembl Protein Viewer:ENSP00000490557.1Re-query CCDS DB by Nucleotide ID:ENST00000638155Re-query CCDS DB by Protein ID:ENSP00000490557
Original member Current member EBI ENST00000649550.1 ENSP00000497549.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649550.1Link to Ensembl Protein Viewer:ENSP00000497549.1Re-query CCDS DB by Nucleotide ID:ENST00000649550Re-query CCDS DB by Protein ID:ENSP00000497549
Original member Current member NCBI NM_001354506.2 NP_001341435.1 Accepted alive Link to Nucleotide Sequence:NM_001354506.2Link to Protein Sequence:NP_001341435.1Re-query CCDS DB by Nucleotide ID:NM_001354506Re-query CCDS DB by Protein ID:NP_001341435Link to BLAST:NP_001341435.1
Original member Current member NCBI NM_001354507.2 NP_001341436.1 Accepted alive Link to Nucleotide Sequence:NM_001354507.2Link to Protein Sequence:NP_001341436.1Re-query CCDS DB by Nucleotide ID:NM_001354507Re-query CCDS DB by Protein ID:NP_001341436Link to BLAST:NP_001341436.1
Original member Current member NCBI NM_001354508.2 NP_001341437.1 Accepted alive Link to Nucleotide Sequence:NM_001354508.2Link to Protein Sequence:NP_001341437.1Re-query CCDS DB by Nucleotide ID:NM_001354508Re-query CCDS DB by Protein ID:NP_001341437Link to BLAST:NP_001341437.1
Original member Current member NCBI NM_001354509.2 NP_001341438.1 Accepted alive Link to Nucleotide Sequence:NM_001354509.2Link to Protein Sequence:NP_001341438.1Re-query CCDS DB by Nucleotide ID:NM_001354509Re-query CCDS DB by Protein ID:NP_001341438Link to BLAST:NP_001341438.1
Original member Current member NCBI NM_001354511.2 NP_001341440.1 Accepted alive Link to Nucleotide Sequence:NM_001354511.2Link to Protein Sequence:NP_001341440.1Re-query CCDS DB by Nucleotide ID:NM_001354511Re-query CCDS DB by Protein ID:NP_001341440Link to BLAST:NP_001341440.1
Original member Current member NCBI NM_001354512.2 NP_001341441.1 Accepted alive Link to Nucleotide Sequence:NM_001354512.2Link to Protein Sequence:NP_001341441.1Re-query CCDS DB by Nucleotide ID:NM_001354512Re-query CCDS DB by Protein ID:NP_001341441Link to BLAST:NP_001341441.1
Original member Current member NCBI NM_001354513.2 NP_001341442.1 Accepted alive Link to Nucleotide Sequence:NM_001354513.2Link to Protein Sequence:NP_001341442.1Re-query CCDS DB by Nucleotide ID:NM_001354513Re-query CCDS DB by Protein ID:NP_001341442Link to BLAST:NP_001341442.1
Original member Current member NCBI NM_001354526.1 NP_001341455.1 Accepted alive Link to Nucleotide Sequence:NM_001354526.1Link to Protein Sequence:NP_001341455.1Re-query CCDS DB by Nucleotide ID:NM_001354526Re-query CCDS DB by Protein ID:NP_001341455Link to BLAST:NP_001341455.1
Original member Current member NCBI NM_001354539.2 NP_001341468.1 Accepted alive Link to Nucleotide Sequence:NM_001354539.2Link to Protein Sequence:NP_001341468.1Re-query CCDS DB by Nucleotide ID:NM_001354539Re-query CCDS DB by Protein ID:NP_001341468Link to BLAST:NP_001341468.1
Original member Current member NCBI NM_001354540.2 NP_001341469.1 Accepted alive Link to Nucleotide Sequence:NM_001354540.2Link to Protein Sequence:NP_001341469.1Re-query CCDS DB by Nucleotide ID:NM_001354540Re-query CCDS DB by Protein ID:NP_001341469Link to BLAST:NP_001341469.1
Original member Current member NCBI NM_001354541.2 NP_001341470.1 Accepted alive Link to Nucleotide Sequence:NM_001354541.2Link to Protein Sequence:NP_001341470.1Re-query CCDS DB by Nucleotide ID:NM_001354541Re-query CCDS DB by Protein ID:NP_001341470Link to BLAST:NP_001341470.1
Original member Current member NCBI NM_001354542.2 NP_001341471.1 Accepted alive Link to Nucleotide Sequence:NM_001354542.2Link to Protein Sequence:NP_001341471.1Re-query CCDS DB by Nucleotide ID:NM_001354542Re-query CCDS DB by Protein ID:NP_001341471Link to BLAST:NP_001341471.1
Original member Current member NCBI NM_001354543.2 NP_001341472.1 Accepted alive Link to Nucleotide Sequence:NM_001354543.2Link to Protein Sequence:NP_001341472.1Re-query CCDS DB by Nucleotide ID:NM_001354543Re-query CCDS DB by Protein ID:NP_001341472Link to BLAST:NP_001341472.1
Original member Current member NCBI NM_001354544.2 NP_001341473.1 Accepted alive Link to Nucleotide Sequence:NM_001354544.2Link to Protein Sequence:NP_001341473.1Re-query CCDS DB by Nucleotide ID:NM_001354544Re-query CCDS DB by Protein ID:NP_001341473Link to BLAST:NP_001341473.1
Original member Current member NCBI NM_001374461.1 NP_001361390.1 Accepted alive Link to Nucleotide Sequence:NM_001374461.1Link to Protein Sequence:NP_001361390.1Re-query CCDS DB by Nucleotide ID:NM_001374461Re-query CCDS DB by Protein ID:NP_001361390Link to BLAST:NP_001361390.1
Original member Current member NCBI NM_130838.4 NP_570853.1 Accepted alive Link to Nucleotide Sequence:NM_130838.4Link to Protein Sequence:NP_570853.1Re-query CCDS DB by Nucleotide ID:NM_130838Re-query CCDS DB by Protein ID:NP_570853Link to BLAST:NP_570853.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341435.1 852 Q05086-2 852 100% 0 0
NP_001341436.1 852 Q05086-2 852 100% 0 0
NP_001341437.1 852 Q05086-2 852 100% 0 0
NP_001341438.1 852 Q05086-2 852 100% 0 0
NP_001341440.1 852 Q05086-2 852 100% 0 0
NP_001341441.1 852 Q05086-2 852 100% 0 0
NP_001341442.1 852 Q05086-2 852 100% 0 0
NP_001341455.1 852 Q05086-2 852 100% 0 0
NP_001341468.1 852 Q05086-2 852 100% 0 0
NP_001341469.1 852 Q05086-2 852 100% 0 0
NP_001341470.1 852 Q05086-2 852 100% 0 0
NP_001341471.1 852 Q05086-2 852 100% 0 0
NP_001341472.1 852 Q05086-2 852 100% 0 0
NP_001341473.1 852 Q05086-2 852 100% 0 0
NP_001361390.1 852 Q05086-2 852 100% 0 0
NP_570853.1 852 Q05086-2 852 100% 0 0

Chromosomal Locations for CCDS 32177.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 25339137 25339257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 25340085 25340228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 25354353 25354426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 25354528 25354683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 25355892 25356056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 25356691 25356896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 25360383 25360527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 25370566 25371812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 25375465 25375763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 25405461 25405462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2559 nt):
ATGAAGCGAGCAGCTGCAAAGCATCTAATAGAACGCTACTACCACCAGTTAACTGAGGGCTGTGGAAATG
AAGCCTGCACGAATGAGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGGATAATAATGCAGCAGCTAT
TAAAGCCCTCGAGCTTTATAAGATTAATGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGC
TCAGCTTACCTTGAGAACTCGAAAGGTGCCCCCAACAACTCCTGCTCTGAGATAAAAATGAACAAGAAAG
GCGCTAGAATTGATTTTAAAGATGTGACTTACTTAACAGAAGAGAAGGTATATGAAATTCTTGAATTATG
TAGAGAAAGAGAGGATTATTCCCCTTTAATCCGTGTTATTGGAAGAGTTTTTTCTAGTGCTGAGGCATTG
GTACAGAGCTTCCGGAAAGTTAAACAACACACCAAGGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAG
ACAAAGATGAAGATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCTATGGAAGAAGACTCAGAAGCATC
TTCCTCAAGGATAGGTGATAGCTCACAGGGAGACAACAATTTGCAAAAATTAGGCCCTGATGATGTGTCT
GTGGATATTGATGCCATTAGAAGGGTCTACACCAGATTGCTCTCTAATGAAAAAATTGAAACTGCCTTTC
TCAATGCACTTGTATATTTGTCACCTAACGTGGAATGTGACTTGACGTATCACAATGTATACTCTCGAGA
TCCTAATTATCTGAATTTGTTCATTATCGTAATGGAGAATAGAAATCTCCACAGTCCTGAATATCTGGAA
ATGGCTTTGCCATTATTTTGCAAAGCGATGAGCAAGCTACCCCTTGCAGCCCAAGGAAAACTGATCAGAC
TGTGGTCTAAATACAATGCAGACCAGATTCGGAGAATGATGGAGACATTTCAGCAACTTATTACTTATAA
AGTCATAAGCAATGAATTTAACAGTCGAAATCTAGTGAATGATGATGATGCCATTGTTGCTGCTTCGAAG
TGCTTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGGGAAGTGGACACAAATCACAATGAAGAAGATG
ATGAAGAGCCCATCCCTGAGTCCAGCGAGCTGACACTTCAGGAACTTTTGGGAGAAGAAAGAAGAAACAA
GAAAGGTCCTCGAGTGGACCCCCTGGAAACTGAACTTGGTGTTAAAACCCTGGATTGTCGAAAACCACTT
ATCCCTTTTGAAGAGTTTATTAATGAACCACTGAATGAGGTTCTAGAAATGGATAAAGATTATACTTTTT
TCAAAGTAGAAACAGAGAACAAATTCTCTTTTATGACATGTCCCTTTATATTGAATGCTGTCACAAAGAA
TTTGGGATTATATTATGACAATAGAATTCGCATGTACAGTGAACGAAGAATCACTGTTCTCTACAGCTTA
GTTCAAGGACAGCAGTTGAATCCATATTTGAGACTCAAAGTTAGACGTGACCATATCATAGATGATGCAC
TTGTCCGGCTAGAGATGATCGCTATGGAAAATCCTGCAGACTTGAAGAAGCAGTTGTATGTGGAATTTGA
AGGAGAACAAGGAGTTGATGAGGGAGGTGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGAAATCTTC
AATCCAGATATTGGTATGTTCACATACGATGAATCTACAAAATTGTTTTGGTTTAATCCATCTTCTTTTG
AAACTGAGGGTCAGTTTACTCTGATTGGCATAGTACTGGGTCTGGCTATTTACAATAACTGTATACTGGA
TGTACATTTTCCCATGGTTGTCTACAGGAAGCTAATGGGGAAAAAAGGAACTTTTCGTGACTTGGGAGAC
TCTCACCCAGTTCTATATCAGAGTTTAAAAGATTTATTGGAGTATGAAGGGAATGTGGAAGATGACATGA
TGATCACTTTCCAGATATCACAGACAGATCTTTTTGGTAACCCAATGATGTATGATCTAAAGGAAAATGG
TGATAAAATTCCAATTACAAATGAAAACAGGAAGGAATTTGTCAATCTTTATTCTGACTACATTCTCAAT
AAATCAGTAGAAAAACAGTTCAAGGCTTTTCGGAGAGGTTTTCATATGGTGACCAATGAATCTCCCTTAA
AGTACTTATTCAGACCAGAAGAAATTGAATTGCTTATATGTGGAAGCCGGAATCTAGATTTCCAAGCACT
AGAAGAAACTACAGAATATGACGGTGGCTATACCAGGGACTCTGTTCTGATTAGGGAGTTCTGGGAAATC
GTTCATTCATTTACAGATGAACAGAAAAGACTCTTCTTGCAGTTTACAACGGGCACAGACAGAGCACCTG
TGGGAGGACTAGGAAAATTAAAGATGATTATAGCCAAAAATGGCCCAGACACAGAAAGGTTACCTACATC
TCATACTTGCTTTAATGTGCTTTTACTTCCGGAATACTCAAGCAAAGAAAAACTTAAAGAGAGATTGTTG
AAGGCCATCACGTATGCCAAAGGATTTGGCATGCTGTAA

Translation (852 aa):
MKRAAAKHLIERYYHQLTEGCGNEACTNEFCASCPTFLRMDNNAAAIKALELYKINAKLCDPHPSKKGAS
SAYLENSKGAPNNSCSEIKMNKKGARIDFKDVTYLTEEKVYEILELCREREDYSPLIRVIGRVFSSAEAL
VQSFRKVKQHTKEELKSLQAKDEDKDEDEKEKAACSAAAMEEDSEASSSRIGDSSQGDNNLQKLGPDDVS
VDIDAIRRVYTRLLSNEKIETAFLNALVYLSPNVECDLTYHNVYSRDPNYLNLFIIVMENRNLHSPEYLE
MALPLFCKAMSKLPLAAQGKLIRLWSKYNADQIRRMMETFQQLITYKVISNEFNSRNLVNDDDAIVAASK
CLKMVYYANVVGGEVDTNHNEEDDEEPIPESSELTLQELLGEERRNKKGPRVDPLETELGVKTLDCRKPL
IPFEEFINEPLNEVLEMDKDYTFFKVETENKFSFMTCPFILNAVTKNLGLYYDNRIRMYSERRITVLYSL
VQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIF
NPDIGMFTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGD
SHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVNLYSDYILN
KSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTRDSVLIREFWEI
VHSFTDEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLL
KAITYAKGFGML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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