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Report for CCDS37919.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37919.1 Public Mus musculus 19 Ms4a10 23 108 98 CCDS HistoryNCBI Gene:69826Re-query CCDS DB by CCDS ID:37919.1Re-query CCDS DB by GeneID:69826See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37919.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072748.12 ENSMUSP00000072531.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072748.12Link to Ensembl Protein Viewer:ENSMUSP00000072531.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000072748Re-query CCDS DB by Protein ID:ENSMUSP00000072531
Original member NCBI NM_023529.2 NP_076018.2 Updated not alive Link to Nucleotide Sequence:NM_023529.2Link to Protein Sequence:NP_076018.2Re-query CCDS DB by Nucleotide ID:NM_023529Re-query CCDS DB by Protein ID:NP_076018
Current member NCBI NM_023529.3 NP_076018.2 Accepted alive Link to Nucleotide Sequence:NM_023529.3Link to Protein Sequence:NP_076018.2Re-query CCDS DB by Nucleotide ID:NM_023529Re-query CCDS DB by Protein ID:NP_076018Link to BLAST:NP_076018.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076018.2 267 Q99N03-1 267 100% 0 0

Chromosomal Locations for CCDS 37919.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 10962958 10963073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10964036 10964129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10964662 10964772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10965758 10965889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10967068 10967124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10968122 10968241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10968592 10968765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (804 nt):
ATGGCTGGCCAAGCTCCCACAGCGGTTCCCGGCAGTGTTACTGGAGAAGTCTCACGATGGCAGAACCTAG
GACCTGCCCAGCCTGCACAGAAAGTAGCCCAGCCCCAAAACCTGGTTCCAGATGGGCACCTTGAGAAAGC
CCTGGAGGGAAGTGACCTTCTACAGAAGTTGGGTGGCTTTCACATCGCCATTGCTTTTGCACACTTGGCC
TTTGGTGGCTACTTGATCTCCACAGTCAAGAATCTGCACCTGGTGGTGTTGAAGTGCTGGTATCCACTCT
GGGGAACTGTCTCTTTTCTCGTTGCAGGGATGGCGGCCATGACAACAGTGACATTCCCTAAGACCTCTCT
GAAGGTTCTCTGTGTGATAGCCAACGTTATCAGCTTGTTCTGCGCACTGGCCGGCTTCTTTGTCATTGCC
AAGGACCTCTTCCTGGAGGGTCCTTTTCCATGGCCAATCTGGAGACCATACCCTGAACCCACAACCTACA
TCCAAAGGCTAGAGCTGACCCTGTTCTGCTTCACCTTCCTGGAGATCTTCCTGTCGGGGTCCACAGCCAT
CACAGCCTATAGGATGAAACGCCTGCAAGCAGAGGACAAGGATGACACCCCTTTCGTTCCTGACACACCT
ATGGAACTTAAAGGTCTATCGCTGGGGCCACCACCATCCTATAAAGATGTGGCCCAAGGACACTCCTCCT
CTGATACTGGCAGAGCCTTGGCCACCAGCTCTGGACTGCTGCTGGCCTCTGACTCCTTCCATCAAGCTCT
GCTTCACACGGGCCCAAGGACCTTGAGAAAGTAG

Translation (267 aa):
MAGQAPTAVPGSVTGEVSRWQNLGPAQPAQKVAQPQNLVPDGHLEKALEGSDLLQKLGGFHIAIAFAHLA
FGGYLISTVKNLHLVVLKCWYPLWGTVSFLVAGMAAMTTVTFPKTSLKVLCVIANVISLFCALAGFFVIA
KDLFLEGPFPWPIWRPYPEPTTYIQRLELTLFCFTFLEIFLSGSTAITAYRMKRLQAEDKDDTPFVPDTP
MELKGLSLGPPPSYKDVAQGHSSSDTGRALATSSGLLLASDSFHQALLHTGPRTLRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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