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Report for CCDS82337.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82337.1 Public Homo sapiens 19 ZNF875 24 110 108 CCDS HistoryNCBI Gene:284459Re-query CCDS DB by CCDS ID:82337.1Re-query CCDS DB by GeneID:284459See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82337.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000589392.5 ENSP00000467562.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589392.5Link to Ensembl Protein Viewer:ENSP00000467562.1Re-query CCDS DB by Nucleotide ID:ENST00000589392Re-query CCDS DB by Protein ID:ENSP00000467562
Original member Current member NCBI NM_001329761.2 NP_001316690.1 Accepted alive Link to Nucleotide Sequence:NM_001329761.2Link to Protein Sequence:NP_001316690.1Re-query CCDS DB by Nucleotide ID:NM_001329761Re-query CCDS DB by Protein ID:NP_001316690Link to BLAST:NP_001316690.1
Original member Current member NCBI NM_001329762.2 NP_001316691.1 Accepted alive Link to Nucleotide Sequence:NM_001329762.2Link to Protein Sequence:NP_001316691.1Re-query CCDS DB by Nucleotide ID:NM_001329762Re-query CCDS DB by Protein ID:NP_001316691Link to BLAST:NP_001316691.1

Chromosomal Locations for CCDS 82337.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37335225 37335257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37347190 37347316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37347777 37347872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37362106 37363775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1926 nt):
ATGGCCACAGGGCTCCTGAGAGCCAAAAAAGAGGCGTTCGTGGCATTCAGGGATGTGGCTGTGTACTTCA
CCCAGGAGGAGTGGAGGTTGTTGAGCCCTGCTCAGAGGACCCTGCACAGGGAGGTGATGCTGGAGACTTA
TAACCATCTGGTCTCACTGGAAATTCCATCTTCTAAACCAAAACTCATTGCTCAGCTGGAGCGAGGGGAA
GCGCCCTGGAGAGAGGAGAGAAAATGTCCACTGGACCTCTGTCCAGCAGAATCGAAGCCAGAAATTCAAC
TTAGTCCCTCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGTCATCT
CTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTCTCCACCTGGGAAAACACTATCCAGAAGATCAG
AAACAACAGCAGGATCCATTCTGCTTTAGTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGAC
TCCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAACAACAGCC
AGCACAGTCCAAGGAAGACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCTAGAG
GAAACAGACAAAGTATTGCATGGTTTAGAAGTCTCAGGATTTGGAGAAATCAAATATGAAGAGTTTGGGC
CAGGCTTTATCAAGGAGTCAAACCTCCTTAGCCTCCAGAAGACACAAACTGGGGAGACACCTTACATGTA
CACTGAGTGGGGAGACAGCTTTGGCAGTATGTCAGTCCTCATCAAAAACCCAAGGACACACTCTGGGGGA
AAGCCTTATGTGTGCAGGGAATGTGGGCGAGGCTTTACGTGGAAGTCAAACCTGATCACACATCAGAGGA
CACACTCAGGGGAGAAACCTTATGTGTGCAAGGATTGTGGACGAGGCTTTACTTGGAAGTCGAACCTCTT
TACACATCAGCGGACACACTCAGGGCTCAAGCCTTATGTGTGCAAGGAATGTGGGCAGAGCTTTAGCCTG
AAGTCAAACCTCATTACCCACCAGAGGGCGCACACTGGGGAGAAGCCTTATGTTTGCAGGGAATGTGGGC
GTGGCTTTCGCCAGCATTCACACCTGGTCAGACACAAGAGGACACATTCAGGAGAGAAGCCTTACATTTG
CAGGGAGTGTGAGCAAGGCTTTAGCCAGAAGTCACACCTCATCAGACACTTAAGGACACACACAGGAGAG
AAGCCTTATGTATGCACAGAATGTGGGCGTCACTTTAGCTGGAAATCAAACCTCAAAACACACCAGAGGA
CACACTCAGGGGTTAAACCTTATGTCTGCCTGGAGTGCGGGCAGTGCTTTAGCCTGAAGTCAAACCTTAA
CAAACACCAGAGGTCACACACGGGGGAGAAGCCATTTGTATGTACGGAGTGTGGGCGAGGCTTTACCCGG
AAATCAACCCTGAGCACGCACCAGAGGACACACTCAGGGGAGAAGCCATTTGTATGTGCTGAGTGTGGAC
GAGGCTTTAATGATAAGTCCACCCTCATTTCACACCAGAGGACACATTCAGGGGAAAAGCCTTTTATGTG
CAGGGAGTGTGGCAGAAGGTTTCGGCAGAAGCCTAACCTGTTTAGGCACAAGAGGGCACACTCAGGTGCC
TTTGTGTGCAGGGAGTGTGGGCAAGGCTTTTGTGCTAAGTTAACTCTCATTAAACACCAGAGAGCACACG
CAGGGGGGAAGCCTCATGTGTGCAGGGAGTGTGGGCAAGGCTTTAGCCGGCAGTCACACCTCATTAGACA
CCAGAGGACACATTCAGGAGAGAAGCCTTATATTTGCAGAAAGTGTGGACGGGGCTTTAGTCGGAAGTCC
AACCTTATCAGACATCAGAGGACACACTCAGGATAG

Translation (641 aa):
MATGLLRAKKEAFVAFRDVAVYFTQEEWRLLSPAQRTLHREVMLETYNHLVSLEIPSSKPKLIAQLERGE
APWREERKCPLDLCPAESKPEIQLSPSCPLIFSSQQALSQHVWLSHLSQLFSSLWAGNPLHLGKHYPEDQ
KQQQDPFCFSGKAEWIQEGEDSRLLFGRVSKNGTSKALSSPPEEQQPAQSKEDNTVVDIGSSPERRADLE
ETDKVLHGLEVSGFGEIKYEEFGPGFIKESNLLSLQKTQTGETPYMYTEWGDSFGSMSVLIKNPRTHSGG
KPYVCRECGRGFTWKSNLITHQRTHSGEKPYVCKDCGRGFTWKSNLFTHQRTHSGLKPYVCKECGQSFSL
KSNLITHQRAHTGEKPYVCRECGRGFRQHSHLVRHKRTHSGEKPYICRECEQGFSQKSHLIRHLRTHTGE
KPYVCTECGRHFSWKSNLKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQRSHTGEKPFVCTECGRGFTR
KSTLSTHQRTHSGEKPFVCAECGRGFNDKSTLISHQRTHSGEKPFMCRECGRRFRQKPNLFRHKRAHSGA
FVCRECGQGFCAKLTLIKHQRAHAGGKPHVCRECGQGFSRQSHLIRHQRTHSGEKPYICRKCGRGFSRKS
NLIRHQRTHSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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