NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS23475.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23475.2 Public Mus musculus 9 Dusp7 23 108 98 CCDS HistoryNCBI Gene:235584Re-query CCDS DB by CCDS ID:23475.2Re-query CCDS DB by GeneID:235584See the combined annotation on chromosome 9 in Sequence Viewer

Public Note for CCDS 23475.2
The coding region has been updated to extend the N-terminus to one that is supported by available conservation data. This extension would result in a protein that is 54 aa longer at the N-terminal.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 23475.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000172306.2 ENSMUSP00000126984.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000172306.2Link to Ensembl Protein Viewer:ENSMUSP00000126984.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000172306Re-query CCDS DB by Protein ID:ENSMUSP00000126984
Original member Current member NCBI NM_153459.4 NP_703189.3 Accepted alive Link to Nucleotide Sequence:NM_153459.4Link to Protein Sequence:NP_703189.3Re-query CCDS DB by Nucleotide ID:NM_153459Re-query CCDS DB by Protein ID:NP_703189Link to BLAST:NP_703189.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_703189.3 422 Q91Z46-1 422 100% 0 0

Chromosomal Locations for CCDS 23475.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 106368798 106369323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106370701 106371135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106373639 106373946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGAAAAACCAGCTCCGCGGGCCCCCAGTGCGGGCGCACATGTCGACTTCGGGGGCGGCGGCGGCGGCGG
CGGCTGGGGGCACTCGGGCGGGGTCGGAGCCCGGTGCGGGATCTGGGTCCGGCGCAGGCATCGGAGCGGG
AGCGACGACGGGAGCGGGGGCCATGCCCTGCAAGAGCGCCGAGTGGCTGCAGGAGGAGCTGGAGGCGCGC
GGTGGCGCGTCCCTGCTGCTGCTAGATTGCCGGCCGCACGAGCTCTTCGAATCGTCGCACATTGAGACGG
CCATCAACCTGGCCATCCCGGGTCTCATGCTGCGCCGCCTGCGCAAAGGCAACCTGCCCATCCGCTCCAT
CATTCCCAACCATGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACGAC
GAGGCCACGGCGGAGTGGCAGCCCGAGCCCGGCGCCCCCGCCTCCGTTCTCGGCCTGCTCCTGCAGAAGC
TGCGAGACGACGGCTGCCAGGCCTACTACCTCCAAGGTGGTTTCAACAAGTTCCAGACGGAATACTCCGA
GCATTGTGAGACTAACGTGGACAGCTCGTCCTCCCCGAGTGGCTCGCCACCCACCTCCGTGCTGGGCCTG
GGGGGCCTGCGCATCAGCTCTGACTGCTCAGACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACTG
AGTCGGATGGCAGCCCTGTACCATCCAGCCAGCCGGCCTTTCCAGTCCAGATCCTGCCCTACCTCTACCT
CGGCTGTGCCAAGGACTCTACCAACCTGGATGTACTTGGCAAATACGGCATCAAATACATCCTCAACGTC
ACACCCAACCTGCCCAACGCCTTTGAGCACGGTGGTGAGTTCACCTACAAGCAAATCCCCATCTCTGACC
ACTGGAGCCAGAACCTCTCTCAGTTCTTCCCCGAGGCCATCAGCTTCATTGATGAAGCCCGCTCCAAGAA
GTGTGGTGTCTTGGTGCACTGCCTAGCAGGCATCAGCCGTTCAGTGACAGTTACTGTAGCCTACCTGATG
CAGAAGATGAACCTGTCCCTCAACGACGCCTATGACTTCGTCAAGAGGAAAAAGTCTAACATCTCGCCCA
ACTTCAACTTCATGGGGCAGCTGCTGGACTTTGAGCGGACGCTGGGGCTCAGCAGCCCATGCGACAACCA
CGCACCCAGTGAGCAGCTCTACTTCTCCACGCCCACCAACCATAACCTGTTCCCGATCAACACGCTCGAG
TCCACGTGA

Translation (422 aa):
MKNQLRGPPVRAHMSTSGAAAAAAAGGTRAGSEPGAGSGSGAGIGAGATTGAGAMPCKSAEWLQEELEAR
GGASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHADKERFATRCKAATVLLYD
EATAEWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQTEYSEHCETNVDSSSSPSGSPPTSVLGL
GGLRISSDCSDGESDRELPSSATESDGSPVPSSQPAFPVQILPYLYLGCAKDSTNLDVLGKYGIKYILNV
TPNLPNAFEHGGEFTYKQIPISDHWSQNLSQFFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLM
QKMNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFERTLGLSSPCDNHAPSEQLYFSTPTNHNLFPINTLE
ST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH