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Report for CCDS29728.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29728.1 Public Mus musculus 19 Plpp6 23 108 98 CCDS HistoryNCBI Gene:74411Re-query CCDS DB by CCDS ID:29728.1Re-query CCDS DB by GeneID:74411See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29728.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045674.3 ENSMUSP00000047776.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045674.3Link to Ensembl Protein Viewer:ENSMUSP00000047776.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000045674Re-query CCDS DB by Protein ID:ENSMUSP00000047776
Original member Current member NCBI NM_028922.3 NP_083198.1 Accepted alive Link to Nucleotide Sequence:NM_028922.3Link to Protein Sequence:NP_083198.1Re-query CCDS DB by Nucleotide ID:NM_028922Re-query CCDS DB by Protein ID:NP_083198Link to BLAST:NP_083198.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083198.1 292 Q9D4F2 292 100% 0 0

Chromosomal Locations for CCDS 29728.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 28964001 28964879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGCCGAGCCCCCGGAGGACCATCGAGGGACGGCCGCTGGGCTCCTCGGGCGGAAGCAGCGTCCCGGGCA
GCCCGGCCCACGGCGGTGGCAGCGGCGGCGGCAGGTTCGAGTTCCAATCGCTGCTGAACTGCCGCGCGGG
CGCGGACCCCGCCTGCGCTCGGCTGCGCGCGTCCGACAGCCCGGTGCACCGGCGCGGCTCCTTCCCGCTG
GCCGCCTCGGGCCCCGCACAAGCAGCCCCGGCCCCGCCGCCGGAGGACGCCCGCATGAACTTGAACCCGT
CCTTCCTGGGCATCGCCCTGCGCTCCCTGCTGGCCATCGACCTGTGGCTGTCCAAGAAGCTGGGGGTGTG
TGCTGGGGAGAGCTCGGCCTGGGGCAGCGTGCGGCCCCTGATGAAGCTGCTGGAGATCTCAGGGCATGGC
ATCCCCTGGCTGCTGGGCACCCTCTACTGCCTGCTTAGGAGCGACAGCTGGGCCGGGCGCGAAGTGCTGA
TGAACCTGCTCTTCGCCCTGCTGTTGGACCTGCTGCTGGTAGCTGTGATTAAAGGGCTGGTCCGCAGGCG
CCGACCCGCGCACAATCAAAAGGACATGTTTTTCACCCTCTCGGTGGACAGGTACTCCTTTCCCTCGGGC
CACGCCACGAGGGCCGCCCTGGTGTCGCGGTTTATCCTAAACCACCTGGTACTGGCCATTCCACTGAGGG
TGCTGGTGGTCCTGTGGGCCTTCGTCTTGGGTCTCTCTAGGGTCATGCTCGGGCGGCACAACGTCACTGA
TGTGGCTTTTGGCTTTTTTCTGGGCTACATGCAGTACAGCATTGTGGATTATTGCTGGCTGTCACCCCAC
AATGTTCCAGTTCTTTTTGTACTGTGGAATCAACAGTGA

Translation (292 aa):
MPSPRRTIEGRPLGSSGGSSVPGSPAHGGGSGGGRFEFQSLLNCRAGADPACARLRASDSPVHRRGSFPL
AASGPAQAAPAPPPEDARMNLNPSFLGIALRSLLAIDLWLSKKLGVCAGESSAWGSVRPLMKLLEISGHG
IPWLLGTLYCLLRSDSWAGREVLMNLLFALLLDLLLVAVIKGLVRRRRPAHNQKDMFFTLSVDRYSFPSG
HATRAALVSRFILNHLVLAIPLRVLVVLWAFVLGLSRVMLGRHNVTDVAFGFFLGYMQYSIVDYCWLSPH
NVPVLFVLWNQQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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