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Report for CCDS84217.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84217.1 Public Mus musculus 16 Dgkg 23 108 98 CCDS HistoryNCBI Gene:110197Re-query CCDS DB by CCDS ID:84217.1Re-query CCDS DB by GeneID:110197See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84217.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023578.13 ENSMUSP00000023578.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023578.13Link to Ensembl Protein Viewer:ENSMUSP00000023578.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000023578Re-query CCDS DB by Protein ID:ENSMUSP00000023578
Original member Current member NCBI NM_001346673.1 NP_001333602.1 Accepted alive Link to Nucleotide Sequence:NM_001346673.1Link to Protein Sequence:NP_001333602.1Re-query CCDS DB by Nucleotide ID:NM_001346673Re-query CCDS DB by Protein ID:NP_001333602Link to BLAST:NP_001333602.1

Chromosomal Locations for CCDS 84217.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 22469249 22469347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22479366 22479426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22481901 22482021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22500224 22500401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22519545 22519635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22548652 22548716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22556326 22556486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22558017 22558106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22562698 22562783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22565287 22565361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22566415 22566494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22570163 22570222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22571671 22571763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22575312 22575400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22576687 22576804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22579743 22579865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22580523 22580597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22584435 22584484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22588299 22588469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22599834 22599887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22600439 22600604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22610779 22610855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22622195 22622261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2250 nt):
ATGAGCGAAGAACAATGGGTCTCTCTCTCATCAGAAGAATTTGATCAACTCCAGAAATACTCTGAATATT
CCTCCAAAAAGATAAAAGATGTATTGGCTGAGTTTAATGAAGGTGGAAGCCTCAGGCAGTATGACCCACA
CAAGCCCATTAGCTATGATGTCTTCAAGCTGTTCATGAGGGCATACCTGGAGGTGGACCTTCCTCAGCCA
CTGAGCACACACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGACAAGAGACACCTGACCATCCAAAGGAGG
GGGCCAGCAGTAGTGAGCCCAATGTCTCAGATTATAATTCGGATAATGCTGCCAAAGCAGATGAGGCCTG
TGCTCCAGACACTGAATCAAAAACAACTAAGACACAAGCACCATCTAAAGAACTAGAGGCTGCAGCCCCA
TGGGAAGACCCAGGTGCTCTGGCTTCAAGCTCAGATGCTCCCGTAGTGTACCTGAAGGATGTCGTGTGTT
ACTTGTCCCTGATGGAGACCGGGCGACCTCAGGATAAGCTAGAATTCATGTTTCGTCTCTATGATTCGGA
TGAAAATGGACTCCTGGACCAAGCGGAGATGGATCAGATTGTGAGCCAAATGCTGCACGTTGCCCAGTAC
CTGGAATGGGATCCCACAGAGCTCAGACCTATACTGAAGGAGATGCTGCAAGGCATGGACTATGACAAGG
ATGGCTTCGTGTCTCTACAGGAGTGGATCAACGGGGGAATGACCACCATCCCTTTGCTGGTCCTCCTGGG
AATGGATGACTCTGGCTCCAAGGGCGATGGGAGGCATGCCTGGACCCTGAAGCACTTCAAGAAGCCCACT
TACTGCAACTTCTGCCGCGCCATGCTGATGGGTGTTGGGAAGCAAGGCCTGTGCTGCATCTACTGTAAAT
ATACAGTCCACCAACGCTGTGTATCCAAAACCATTCATGGATGTGTGAAAACAAACTCCAAAGCCAAAAG
GAGTGGCGAGTTTCACCGCAAATGTGAATTATCGACAGTGTGCGACGGTGGGGAACTCAAAGACCACATT
TTGCTGCCTACCTCCATATGCCCCGTCTCCGGAGACCGGCAAGGAGGGAAGTCCGATGGCAGTGTGGCCG
CCAAGGGTGAACTTGTAACTCAGTATAAGATCATCCCTAGCCCGGGGACGCATCCCCTGCTGGTCCTGGT
GAACCCCAAGAGTGGAGGAAGACAAGGAGAAAGAATTCTTCGGAAATTTCACTACCTGCTCAACCCCGAA
CAAGTTTTCAACCTGGACAATGGGGGACCTACACCAGGATTGAACTTCTTTCATGATACCCCAGACTTCC
GTGTTCTTGCCTGTGGCGGAGATGGGACCGTTGGCTGGATTTTGGATTGCATTGATAAGGCTAACTTCAC
AAAGCACCCACCGGTGGCTGTCCTGCCTCTTGGAACAGGGAATGACCTCGCACGATGCCTCCGCTGGGGA
GGAGGTTACGAAGGGGGCAGCTTGACCAAAATCCTGAAGGAAATTGAACAGAGCCCCTTGGTGATGCTGG
ACCGTTGGTACCTAGAGGTCATGCCCAGGGAAGAGGTGGAGAATGGAGACCAAGTCCCATACAACATCAT
GAACAACTATTTCTCCATTGGTGTGGATGCTTCAATTGCACACAGATTCCATATGATGAGAGAGAAACAC
CCTGAAAAATTCAACAGCAGGATGAAGAACAAGCTGTGGTATTTCGAATTTGGTACCTCGGAAACCTTTG
CAGCCACCTGCAAGAAACTCCATGACCACATAGAGCTGGAGTGTGACGGAGTTGAGGTGGATCTGAGCAA
CATCTTCCTGGAAGGCATCGCCATTCTTAATATTCCCAGCATGTACGGAGGCACCAATCTCTGGGGAGAA
ACCAAGAAGAACCGGGCTGTGATCCGGGAAAGCAGGAAGAGCGTCACAGACCCAAAGGAGCTGAAATGCT
GTGTCCAAGACCTCAGCGATCAGCTCCTTGAAGTGGTGGGTCTAGAGGGAGCCATGGAGATGGGACAGAT
CTACACTGGCCTGAAGAGTGCGGGCAGGAGACTGGCCCAGTGCTCCTCTGTCACCATTAGGACTAACAAG
CTTCTGCCGATGCAAGTAGACGGAGAGCCCTGGATGCAGCCACAATGCACGATTAAAATCACTCACAAAA
ACCAGGCACCTATGATGATGGGGCCTCCCCAGAAGAGCAGCTTTTTTTCTCTGAGGAGGAAAAGCCGTTC
AAAAGACTAA

Translation (749 aa):
MSEEQWVSLSSEEFDQLQKYSEYSSKKIKDVLAEFNEGGSLRQYDPHKPISYDVFKLFMRAYLEVDLPQP
LSTHLFLAFSQKPRQETPDHPKEGASSSEPNVSDYNSDNAAKADEACAPDTESKTTKTQAPSKELEAAAP
WEDPGALASSSDAPVVYLKDVVCYLSLMETGRPQDKLEFMFRLYDSDENGLLDQAEMDQIVSQMLHVAQY
LEWDPTELRPILKEMLQGMDYDKDGFVSLQEWINGGMTTIPLLVLLGMDDSGSKGDGRHAWTLKHFKKPT
YCNFCRAMLMGVGKQGLCCIYCKYTVHQRCVSKTIHGCVKTNSKAKRSGEFHRKCELSTVCDGGELKDHI
LLPTSICPVSGDRQGGKSDGSVAAKGELVTQYKIIPSPGTHPLLVLVNPKSGGRQGERILRKFHYLLNPE
QVFNLDNGGPTPGLNFFHDTPDFRVLACGGDGTVGWILDCIDKANFTKHPPVAVLPLGTGNDLARCLRWG
GGYEGGSLTKILKEIEQSPLVMLDRWYLEVMPREEVENGDQVPYNIMNNYFSIGVDASIAHRFHMMREKH
PEKFNSRMKNKLWYFEFGTSETFAATCKKLHDHIELECDGVEVDLSNIFLEGIAILNIPSMYGGTNLWGE
TKKNRAVIRESRKSVTDPKELKCCVQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVTIRTNK
LLPMQVDGEPWMQPQCTIKITHKNQAPMMMGPPQKSSFFSLRRKSRSKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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