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Report for CCDS84536.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84536.1 Public Mus musculus 2 Dync1i2 23 108 98 CCDS HistoryNCBI Gene:13427Re-query CCDS DB by CCDS ID:84536.1Re-query CCDS DB by GeneID:13427See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84536.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112140.7 ENSMUSP00000107768.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112140.7Link to Ensembl Protein Viewer:ENSMUSP00000107768.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112140Re-query CCDS DB by Protein ID:ENSMUSP00000107768
Original member Current member EBI ENSMUST00000112144.8 ENSMUSP00000107772.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112144.8Link to Ensembl Protein Viewer:ENSMUSP00000107772.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112144Re-query CCDS DB by Protein ID:ENSMUSP00000107772
Original member Current member NCBI NM_001347173.1 NP_001334102.1 Accepted alive Link to Nucleotide Sequence:NM_001347173.1Link to Protein Sequence:NP_001334102.1Re-query CCDS DB by Nucleotide ID:NM_001347173Re-query CCDS DB by Protein ID:NP_001334102Link to BLAST:NP_001334102.1

Chromosomal Locations for CCDS 84536.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 71214448 71214555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71219301 71219418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71227827 71227844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71228600 71228690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71233649 71233708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71235915 71236030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71246689 71246784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71247013 71247175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71247289 71247388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71247821 71247946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71248787 71248933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71249309 71249422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71249719 71249852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71250842 71250986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71258084 71258224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71260822 71260947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71262648 71262761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1917 nt):
ATGTCGGACAAAAGTGATTTAAAAGCTGAGTTGGAACGTAAGAAGCAACGGTTGGCCCAAATCAGAGAAG
AAAAGAAGAGGAAAGAAGAGGAAAGGAAAAAAAAGGAAACTGATCAGAAGAAGGAAGCTGCTGTTTCTGT
ACAAGAAGAGTCTGATCTTGAAAAAAAAAGAAGAGAAGCTGAGGCATTGCTTCAAAGCATGGGACTAACT
ACGGACTCCCCTATTGTTTTTTCTGAGTACTGGGTCCCTCCTCCTATGTCTCCATCCTCCAAGTCGGTGA
GCACGCCAAGTGAAGCTGGAAGCCAGGATTCTGGAGATGGCGCCGTGGGATCTAGGACGCTGCATTGGGA
TACAGATCCATCAGTTCTTCAGCTTCACTCAGATTCCGATTTGGGACGAGGACCTATTAAACTTGGAATG
GCCAAAATTACTCAAGTTGACTTTCCCCCTCGAGAAATCGTCACATACACAAAGGAAACTCAGACCCCGG
TTACAGCTCAACCCAAAGAAGATGAGGAGGAGGAAGATGATGTAGCAACTCCTAAACCTCCTGTTGAACC
TGAAGAAGAGAAAACTTTGAAAAAAGACGAAGAGAATGATAGCAAAGCTCCACCTCATGAACTAACTGAA
GAAGAAAAGCAACAGATTTTACACTCAGAAGAATTTTTAAGTTTCTTTGACCATTCTACGAGAATTGTAG
AAAGAGCCCTTTCTGAGCAGATTAACATCTTCTTTGACTACAGTGGGAGAGACTTGGAAGACAAAGAAGG
GGAGATTCAAGCAGGTGCTAAGCTGTCATTAAATCGACAGTTCTTTGATGAGCGTTGGTCAAAGCATCGA
GTTGTTAGTTGTTTGGATTGGTCATCCCAGTATCCAGAATTACTTGTGGCTTCCTATAATAACAATGAAG
AGGCTCCTCATGAGCCTGATGGTGTGGCCCTCGTGTGGAATATGAAGTACAAAAAAACTACCCCAGAGTA
TGTGTTCCACTGCCAGTCAGCTGTAATGTCTGCTACATTTGCAAAATTTCATCCGAATCTTGTTGTTGGA
GGTACATATTCAGGCCAGATTGTGCTTTGGGATAACCGCAGCAATAAAAGAACTCCTGTCCAGAGAACGC
CGCTGTCAGCTGCTGCACACACACACCCTGTCTACTGTGTAAATGTTGTTGGAACACAAAATGCTCACAA
TCTGATTAGCATCTCTACTGATGGAAAAATTTGTTCCTGGAGTTTGGACATGCTTTCCCATCCACAGGAT
AGCATGGAGTTGGTTCATAAACAGTCAAAGGCAGTAGCTGTAACATCTATGTCTTTCCCTGTTGGAGACG
TCAACAACTTTGTTGTGGGCAGTGAAGAAGGTTCTGTGTATACAGCATGCCGCCATGGCAGCAAAGCTGG
AATCAGTGAGATGTTTGAGGGACACCAGGGACCCATCACTGGAATCCACTGTCACGCGGCTGTTGGAGCA
GTAGACTTCTCACATCTGTTTGTCACTTCGTCTTTTGACTGGACAGTTAAACTTTGGACAACTAAGAATA
ACAAGCCTTTGTACTCATTTGAAGATAATTCAGACTATGTCTATGATGTTATGTGGTCACCCACCCACCC
AGCCCTGTTTGCCTGTGTGGACGGCATGGGGAGACTGGATCTATGGAATCTCAACAATGACACAGAGGTA
CCAACTGCCAGCATTTCTGTGGAGGGCAACCCTGCTCTTAACCGTGTGAGATGGACCCACTCAGGAAGAG
AAATTGCCGTGGGTGATTCTGAAGGACAGATTGTCATCTATGATGTGGGAGAGCAGATCGCTGTTCCCCG
AAATGATGAATGGGCAAGATTTGGCCGAACACTCGCAGAAATTAACGCAAACCGAGCTGACGCAGAGGAG
GAGGCAGCTACCCGAATCCCTGCCTAG

Translation (638 aa):
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAAVSVQEESDLEKKRREAEALLQSMGLT
TDSPIVFSEYWVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHSDSDLGRGPIKLGM
AKITQVDFPPREIVTYTKETQTPVTAQPKEDEEEEDDVATPKPPVEPEEEKTLKKDEENDSKAPPHELTE
EEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHR
VVSCLDWSSQYPELLVASYNNNEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVG
GTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQD
SMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGA
VDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEV
PTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEE
EAATRIPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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