CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS84123.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
84123.1 |
Public |
Mus musculus |
14 |
Ktn1 |
23 |
108 |
98 |
|
Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 84123.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000187262.6 |
ENSMUSP00000140206.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001347519.1 |
NP_001334448.1 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001334448.1 |
1252 |
Q61595-9 |
1252 |
99.2812% |
0 |
9 |
Chromosomal Locations for CCDS 84123.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3759 nt): ATGGAGCTGTACGAGTCAACGTATTTTGTTGTCCTCATCCCTTCAGTAGTTATTACCGTCATTTTCCTTT TCTTCTGGCTTTTCATGAAAGAAACATTATATGATGAAGTTCTTGCAAAACAAAAAAGAGAGCAAAAGTT GATTTCTACAAAAACAGATAAAAAGAAGGCAGAAAAGAAGAAGAATAAAAAGAAAGAAATCCAGAATGGG ACCCTTCGTGAATCTGATTCTGAGCACGTGCCTCGGGACTTTAAATTATCCGATGCTTCTCCCGCGGAGG ATGAACAGTTTGTACCTGCTCCACTGAATGTGGCAGAAACTTCCAGTAGTGTTAGGGAAAGAAAGAAGAA GGAGAAGAAACAAAAACCTTCCCTTGAAGAGCAGGTCATCAAAGAAAGTGATGCATCAAAGATCCCAGGC AAAAAAGTGGAACCTGTCCTAGTTACCAAACAGCCGGCCCCACCCCCACCCCTCGAAGCAGCTGCCTTGA AGAAGAAAGCAGGGCAGAAGAAGTCTAAAAATGGAAGCGAAGAGCAAGATAAAAAGGTGGAAATGCTGAT GGCACCTTCAAAAGAGCAGGACGTGTTGCTTTCCCATCAAGACACTAAGCAAGAAGGTGGACTAGGAAAG AAGAAAGGCTTGTCAAAGAAGCAAAAGTCAGAAAATGTTGCAGTCTTGGTAGACGAGCCCCTTATTCATG CAACTACTTACATTCCTTTGGATAATGCTAACTCAAATCTCATGATGGATAAGAGAGAAATTATTGATAT GATTAAACCTGATCATGTTGAAGGAATCCAGAAATCTGGAACAAAAAAGCTGAAGATTGAAACTGACAAA GAAAATGCTGAAGTGAAATTTAAAGATTTCCTTCTGTCCTTGAAGACTATGATGTTTTCTGAAGATGAAG CTCTTTGTGTTGTAGACCTGCTGAAGGAAAAGTCTGGTGTGATAAAAGAAGCTTTAAAGAAGTCGAATAA AGGAGAACTGAGTGGTCTTCTGCATCAACTTCAGGAGAAGGAGAGGCTGCTCTCTGCCATGAAGGAAGAT GCTGCTGCCTCAAAGGAGCGCTGTAAGCAGTTGACTCAGGAAATGATGACAGAGAAAGAAAGAAGCAGTG TTGTTATAGCAAGAATGAAAGATCGGATTGGAACACTAGAAAAGGAACACAATATATTTCAAAACAAAAT GCATGCCAGTTACCAAGAGACTCAGCAGATGCAGATGAAGTTTCAGCAAGTTCAGGAACAAATGGAAGCA GAGATAGCTCATTTGAAGCAGGAAAATGGTATCCTGAGAGATGCTGTCAGTAACACTACAAACCAACTGG AAAGCAAGCAATCCGCAGAGCTAAATAAACTGCGCCAAGACTGTGGGAGGCTGGTGAGTGAACTGAACGA GAAGACAGGAAAGCTGCAGCAAGAGGGAGTCCAGAAGAAGAATGCGGAGCAAGCTGCTACCCAGCTCAAG GTTCAACTGCAAGAAGCTGAGAGGCGCTGGGAAGAAGTTCAGAGCTACATCAGGAAGAGGACGGCGGAGC ATGAGGCTGCCCAGCAAGATTTACAAAGTAAATTTGTGGCCAAAGAAAATGAAGTCCAGAGTCTACATAG TAAGCTCACAGACACCTTGGTATCAAAACAGCAATTGGAGCAAAGACTAATGCAGTTGATGGAATCCGAG CAAAAGAGGGCGAGCAAAGAAGAGTCTCTGCAGATCCAAGTGCAGGATATTTTGGAACAAAACGAGGCTT TGAAAGCTCAGATTCAACAATTCCATTCCCAGATAGCAGCTCAGACCTCCGCTTCAGTTCTAGCAGAAGA ATTACATAAAGTGATTGCAGAAAAGGACAAGCAGCTAAAGCAGACTGAAGATTCATTAGCGAATGAACAG GATCACTTAGCAAGCAAGGAGGAGGAGCTTAAGGATGTACAGAATATGAATTTCTTATTAAAAGCTGAAG TGCAGAAATTGCAGGCCCTGGCTAATGAGCAGGCTGCTACCGCACATGAGGTGGAGAAGATGCAGAAGAG TATTCACGTAAAGGAAGATAAAATAAGACTGCTTGAGGAGCAGCTGCAGCACGAAGTTGCCAGCAAAATG GAAGAATTGAAGATTCTGAGTGAGCAGAATAAAGCATTACAGTCGGAAGTTCAGAAACTGCAGACCGCTG TTTCTCAGCAGCCTAATAAAGATGTTGTGGAACAAATGGAAAAATGCATTCAAGAAAAAGATGAGAAGTT AAGGACTGTGGAAGAATTACTGGAGACTGGACTCATTCAGGTGGCCACCAGAGAGGAGGAGCTGAGTGCC ATAAGAACAGAGAACTCCACCCTGACCAGAGAAGTTCAAGAGTTGAAGGCTAAGCAGAGCGATCAGGTTT CTTTTGTGTCTCTAATTGAAGATCTTAAGAGAGTGATCCATGAGAAAGATGGACAGATCAAGTCTGTGGA AGAGCTTCTAGAAGTTGAACTTCTCAAAGTTGCAAATAAGGAGAAAACTGTCCAGGCTTTGAAACAGGAA ATAGAGGTTCTAAAAGAAGAAATAGGAAATGCCCAGCTTGAAAAGGCTCACCAGCTGTCTGTCACTTCTC AAGTCCAGGAGCTGCAGAACTTATTAAGAGGCAAGGAAGAGCAGGTGAACAGCATGAAGGCTGCCTTAGA AGACAGGGACAGAGACCTGAGAGGGAGAGGGACGTGCGCACAGGTGTGTTCGACACCACAATTTGAAGAA CTTGAAAGTGTGTTGAAAGAAAAGGACAATGAAATTAAGAGAATAGAAGTTAAATTAAAGGACACGGAGA GTGATGTTTCTAAGATGTCAGAGCTATTAAAGGAGGTACAAGAGGAAAATAAATTCCTTAAGTGCCAGCT CAGTCACCAGAAGCACCAACAGGCATCTTTTCCCTCTCAGGAAGAATTACAAACAGTAATTTCAGAAAAA GAGAAAGAAATAACTGATCTCTGCAATGAGTTAGAGTCTTTGAAGAATGCTGTTGAACACCAGAGGAAGA AAAACAATGACCTTCGGGAGAAAAACTGGGAAGCAATGGAAGCTTTGGCATCAACTGAAAAAATGCTGCA GGACAGAGTGAACAAGACTTCCAAGGAAAGACGGCAACACGTGGAAGCTATTGAGTTAGAGTCCAAAGAC CTTCTGAAGAGGTTATTTCCAACGGTGTCTGTCCCTTCTAATTTGAATTACAGTGAATGGTTGCGTGGCT TTGAAAAGAAGGCAAAAGCGTGCGTAGCTGGAACTTCAGACGCAGAGGCGGTCAAGGTTTTGGAGCACAG ATTGAAAGAAGCTAGTGAGATGCACACTTTGCTACAGCTGGAATGTGAAAAATACAAGTCGGTCCTTGCA GAAACAGAAGGGATTTTGCAAAAACTTCAGCGAAGTGTGGAGCAAGAAGAAAGTAAATGGAAAATTAAAG CTGACGAGTCTCAAAGGATGATTAAACAGCTGAGAAGAGAAAGAGAGCATTTGGAAATGGAGCTAGAGAA GGCCGAGATGGAGCGATCGACTTACGTGATGGAAGTCAGAGAGCTCAAGACACAGTTAAATGAAACACAC TCAAAACTTCAAAATGAACAAACGGAGAGAAAGAAGGTAGCTGATGATTTGCATAAGGCTCAACAGTCCC TGAACTCTATCCACTCAAAAATCTCACTGAAAGCTGCTGGAGACACTGTTGTTATTGAGAACAGTGATAT TTCCCCAGAAATGAGTGAAGTAATTGGGAAATTACTCGTTAGAAGTTAA
Translation (1252 aa): MELYESTYFVVLIPSVVITVIFLFFWLFMKETLYDEVLAKQKREQKLISTKTDKKKAEKKKNKKKEIQNG TLRESDSEHVPRDFKLSDASPAEDEQFVPAPLNVAETSSSVRERKKKEKKQKPSLEEQVIKESDASKIPG KKVEPVLVTKQPAPPPPLEAAALKKKAGQKKSKNGSEEQDKKVEMLMAPSKEQDVLLSHQDTKQEGGLGK KKGLSKKQKSENVAVLVDEPLIHATTYIPLDNANSNLMMDKREIIDMIKPDHVEGIQKSGTKKLKIETDK ENAEVKFKDFLLSLKTMMFSEDEALCVVDLLKEKSGVIKEALKKSNKGELSGLLHQLQEKERLLSAMKED AAASKERCKQLTQEMMTEKERSSVVIARMKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQEQMEA EIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLK VQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESE QKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQ DHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASKM EELKILSEQNKALQSEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSA IRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQE IEVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVCSTPQFEE LESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQKHQQASFPSQEELQTVISEK EKEITDLCNELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKMLQDRVNKTSKERRQHVEAIELESKD LLKRLFPTVSVPSNLNYSEWLRGFEKKAKACVAGTSDAEAVKVLEHRLKEASEMHTLLQLECEKYKSVLA ETEGILQKLQRSVEQEESKWKIKADESQRMIKQLRREREHLEMELEKAEMERSTYVMEVRELKTQLNETH SKLQNEQTERKKVADDLHKAQQSLNSIHSKISLKAAGDTVVIENSDISPEMSEVIGKLLVRS
|