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Report for CCDS2842.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2842.1 Public Homo sapiens 3 ABHD14B 24 110 108 CCDS HistoryNCBI Gene:84836Re-query CCDS DB by CCDS ID:2842.1Re-query CCDS DB by GeneID:84836See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2842.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361143.10 ENSP00000354841.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361143.10Link to Ensembl Protein Viewer:ENSP00000354841.5Re-query CCDS DB by Nucleotide ID:ENST00000361143Re-query CCDS DB by Protein ID:ENSP00000354841
Original member Current member EBI ENST00000395008.6 ENSP00000378455.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395008.6Link to Ensembl Protein Viewer:ENSP00000378455.2Re-query CCDS DB by Nucleotide ID:ENST00000395008Re-query CCDS DB by Protein ID:ENSP00000378455
Original member Current member EBI ENST00000483233.5 ENSP00000420065.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000483233.5Link to Ensembl Protein Viewer:ENSP00000420065.1Re-query CCDS DB by Nucleotide ID:ENST00000483233Re-query CCDS DB by Protein ID:ENSP00000420065
Original member Current member EBI ENST00000525795.1 ENSP00000433388.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000525795.1Link to Ensembl Protein Viewer:ENSP00000433388.1Re-query CCDS DB by Nucleotide ID:ENST00000525795Re-query CCDS DB by Protein ID:ENSP00000433388
Original member Current member NCBI NM_001146314.2 NP_001139786.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001146314.2Link to Protein Sequence:NP_001139786.1Re-query CCDS DB by Nucleotide ID:NM_001146314Re-query CCDS DB by Protein ID:NP_001139786Link to BLAST:NP_001139786.1
Original member Current member NCBI NM_032750.3 NP_116139.1 Accepted alive Link to Nucleotide Sequence:NM_032750.3Link to Protein Sequence:NP_116139.1Re-query CCDS DB by Nucleotide ID:NM_032750Re-query CCDS DB by Protein ID:NP_116139Link to BLAST:NP_116139.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139786.1 210 Q96IU4-1 210 100% 0 0
NP_116139.1 210 Q96IU4-1 210 100% 0 0

Chromosomal Locations for CCDS 2842.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 51969426 51969605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51969943 51970184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51971460 51971670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGGCAGCAAGCGTGGAGCAGCGCGAGGGCACCATCCAGGTGCAGGGCCAGGCCCTCTTCTTCCGAGAGG
CCCTGCCCGGCAGTGGGCAGGCTCGCTTCTCTGTACTGCTGCTGCATGGTATTCGCTTCTCCTCCGAGAC
CTGGCAGAACCTGGGTACACTGCACAGGCTGGCCCAGGCTGGCTACCGGGCTGTGGCCATTGACCTGCCA
GGTCTGGGGCACTCCAAGGAAGCAGCAGCCCCTGCCCCTATTGGGGAGCTGGCCCCTGGCAGCTTCCTGG
CGGCTGTGGTGGATGCCTTGGAGCTGGGCCCCCCGGTTGTGATCAGTCCATCACTGAGTGGCATGTACTC
CCTGCCCTTCCTCACGGCCCCTGGCTCCCAGCTCCCGGGCTTTGTGCCAGTGGCCCCCATCTGCACTGAC
AAAATCAATGCTGCCAACTATGCCAGTGTGAAGACTCCAGCTCTGATTGTATATGGAGACCAGGACCCCA
TGGGTCAGACCAGCTTTGAGCACCTGAAGCAGCTGCCCAACCACCGGGTGCTGATCATGAAGGGGGCGGG
GCACCCCTGTTACCTGGACAAACCAGAGGAGTGGCATACAGGGCTGCTGGACTTCCTGCAGGGGCTCCAG
TGA

Translation (210 aa):
MAASVEQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLP
GLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD
KINAANYASVKTPALIVYGDQDPMGQTSFEHLKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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