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Report for CCDS15123.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15123.1 Public Mus musculus 1 Nppc 23 108 98 CCDS HistoryNCBI Gene:18159Re-query CCDS DB by CCDS ID:15123.1Re-query CCDS DB by GeneID:18159See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15123.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027449.5 ENSMUSP00000027449.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027449.5Link to Ensembl Protein Viewer:ENSMUSP00000027449.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000027449Re-query CCDS DB by Protein ID:ENSMUSP00000027449
Original member Current member NCBI NM_010933.5 NP_035063.1 Accepted alive Link to Nucleotide Sequence:NM_010933.5Link to Protein Sequence:NP_035063.1Re-query CCDS DB by Nucleotide ID:NM_010933Re-query CCDS DB by Protein ID:NP_035063Link to BLAST:NP_035063.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035063.1 126 Q61839 126 100% 0 0

Chromosomal Locations for CCDS 15123.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 86669664 86669954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86670349 86670438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (381 nt):
ATGCACCTCTCCCAGCTGATCGCCTGCGCCCTGCTGCTCGCGCTACTCTCGCTCCGGCCCTCTGAAGCCA
AGCCCGGGACACCACCGAAGGTCCCGAGAACCCCGCCAGGGGAGGAGCTGGCGGATTCCCAGGCAGCTGG
TGGCAATCAGAAAAAGGGTGACAAGACTCCAGGCAGCGGGGGAGCCAATCTCAAGGGAGACCGATCGCGA
CTGCTCCGGGACCTGCGTGTGGACACCAAGTCCCGGGCTGCTTGGGCCCGCCTTCTGCACGAGCACCCCA
ACGCGCGCAAATACAAAGGCGGCAACAAGAAGGGCTTGTCCAAAGGCTGCTTTGGCCTCAAGCTGGACCG
GATCGGCTCCATGAGCGGTCTGGGATGTTAG

Translation (126 aa):
MHLSQLIACALLLALLSLRPSEAKPGTPPKVPRTPPGEELADSQAAGGNQKKGDKTPGSGGANLKGDRSR
LLRDLRVDTKSRAAWARLLHEHPNARKYKGGNKKGLSKGCFGLKLDRIGSMSGLGC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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