CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS56901.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
56901.1 |
Public |
Mus musculus |
13 |
Hmgcs1 |
23 |
108 |
98 |
|
Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 56901.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000179869.2 |
ENSMUSP00000136944.1 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000224188.1 |
ENSMUSP00000153064.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001291439.1 |
NP_001278368.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_145942.5 |
NP_666054.2 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 56901.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1563 nt): ATGCCTGGGTCACTTCCTTTGAATGCAGAGGCTTGCTGGCCAAAAGATGTGGGAATCGTTGCCCTTGAAA TCTACTTTCCTTCTCAATATGTCGATCAAGCTGAGTTGGAAAAATACGATGGTGTAGATGCTGGAAAGTA TACCATCGGCCTGGGCCAGGCCAGGATGGGCTTCTGCACGGATCGTGAAGACATCAACTCTCTTTGCCTG ACTGTGGTTCAGAAACTGATGGAGAGACATAGCCTTTCCTATGATTGCATTGGGCGGCTAGAAGTTGGAA CAGAGACAATCATCGACAAATCGAAATCAGTGAAGTCTAATTTGATGCAGCTGTTTGAGGAGTCTGGGAA TACAGATATAGAAGGAATAGATACAACCAATGCATGCTATGGGGGCACAGCTGCAGTCTTCAATGCCGTG AACTGGGTCGAATCCAGCTCTTGGGATGGACGATATGCTCTGGTAGTTGCAGGAGACATTGCTATATATG CCACAGGAAATGCCAGACCTACAGGTGGAGTTGGAGCTGTGGCCCTGCTAATTGGGCCAAACGCTCCTCT AATTTTTGACCGAGGGCTCCGTGGGACACACATGCAGCATGCCTATGACTTTTACAAGCCTGACATGCTC TCCGAGTACCCTGTGGTCGACGGAAAGCTCTCCATACAGTGCTACCTCAGCGCCCTGGACCGCTGCTATT CTGTCTACCGCAAAAAGATCCGTGCCCAGTGGCAGAAAGAGGGAAAGGATAAAGATTTTACCCTGAATGA TTTTGGCTTCATGATCTTTCACTCACCATATTGTAAACTGGTGCAGAAATCTCTAGCTCGGATGTTCCTG AATGACTTTCTTAATGATCAAAACAGAGATAAAAACAGTATTTACAGTGGACTGGAAGCCTTTGGGGACG TTAAATTAGAAGATACTTACTTTGACAGAGATGTAGAAAAGGCATTTATGAAGGCTAGTTCTGAGCTATT CAACCAGAAAACAAAGGCGTCTTTGCTTGTGTCTAATCAGAATGGAAATATGTACACATCCTCTGTCTAT GGTTCCCTGGCTTCTGTCCTGGCACAGTACTCACCTCAGCAGTTGGCAGGGAAGAGGGTTGGAGTGTTCT CTTACGGTTCTGGCTTGGCTGCCACGCTGTACTCCCTTAAAGTCACACAAGACGCCACACCAGGATCTGC CCTTGATAAAATAACAGCAAGTTTATGTGACCTTAAATCAAGGCTTGACTCGAGAACTTGTGTGGCACCG GATGTCTTTGCTGAAAACATGAAGCTCAGAGAGGACACACATCACTTAGCCAACTATATTCCCCAGTGTT CAATAGACTCACTCTTTGAAGGAACGTGGTATCTGGTCAGAGTGGATGAAAAACACAGAAGGACTTACGC CCGGCGCCCCTTCACAAATGACCACAGTTTGGATGAAGGAATGGGGCTCGTGCATAGTAACACAGCAACA GAGCATATTCCAAGCCCTGCTAAGAAAGTGCCAAGACTCCCTGCAACCTCGGCCGAATCTGAATCAGCTG TCATCAGTAACGGGGAGCACTGA
Translation (520 aa): MPGSLPLNAEACWPKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCL TVVQKLMERHSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAV NWVESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLRGTHMQHAYDFYKPDML SEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQKEGKDKDFTLNDFGFMIFHSPYCKLVQKSLARMFL NDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVY GSLASVLAQYSPQQLAGKRVGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTCVAP DVFAENMKLREDTHHLANYIPQCSIDSLFEGTWYLVRVDEKHRRTYARRPFTNDHSLDEGMGLVHSNTAT EHIPSPAKKVPRLPATSAESESAVISNGEH
|