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Report for CCDS51506.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51506.1 Public Mus musculus 5 Arap2 23 108 98 CCDS HistoryNCBI Gene:212285Re-query CCDS DB by CCDS ID:51506.1Re-query CCDS DB by GeneID:212285See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51506.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076623.7 ENSMUSP00000075924.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076623.7Link to Ensembl Protein Viewer:ENSMUSP00000075924.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000076623Re-query CCDS DB by Protein ID:ENSMUSP00000075924
Original member Current member NCBI NM_178407.3 NP_848494.2 Accepted alive Link to Nucleotide Sequence:NM_178407.3Link to Protein Sequence:NP_848494.2Re-query CCDS DB by Nucleotide ID:NM_178407Re-query CCDS DB by Protein ID:NP_848494Link to BLAST:NP_848494.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848494.2 1703 Q8BZ05-1 1703 99.8238% 0 3

Chromosomal Locations for CCDS 51506.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 62604270 62604656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62606075 62606209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62611704 62611767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62613994 62614029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62615004 62615086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62621839 62621966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62630133 62630261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62635952 62636069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62638962 62639036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62641328 62641396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62642795 62642942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62646183 62646288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62649689 62649901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62654046 62654209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62668789 62668852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62669027 62669225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62669880 62669982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62670936 62671080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62675952 62676086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62676512 62676686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62677102 62677284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62677945 62678030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62683355 62683554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62685561 62685676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62698241 62698419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62706608 62706728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62714733 62714802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62730521 62730874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62732970 62733061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62733900 62733976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62734988 62735046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62748776 62749674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5112 nt):
ATGTCCTCAGTCAGCGAAGTAAATGCGGACATCAGAGATTTCCTGATGAGCATCAATTTGGAGCAGTACC
TCTTACATTTCCGTGAATTCGGTTTTTATACCGTGAGGGACTGCACGTCGATAAATGACAGCGTACTCCA
TCAGATTGGAATATCACCTACTGGACACCGTAGGAGGATACTGAAACAGTTACAAATGATCTTTTCAAAA
ATGCAAGACTTCCCCATATATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAAC
ACAGTGATCCATCTTCCAGCACCCACACCGGCATAGAGTGTTCCGATTCCATTACTGTCCATAGACCTGG
CCCGGCACCATCAGAGATGGTTACAACCAGTACCCTTAGTGAAGGAAACTGTCAGTCTCCGAAATCACAT
GATAAGCTATGTCTTTCTTCACATGACCTGCTCTGTCCAGAAGAAGAACTACACCAGAACGTGGATTCTT
CGAAAGATTCTTTATTTGGTGGTGTAAATGTCAAAATAGATCCTTTGATTACCAAGAGGGCTGTGGAGTA
CACAGCTGGAGAAGAACACACAGAAAAAGGCAATTTGACCTCAGAAGATTCCAGCAAGGCACTTAGTACA
AACACTGAATGTCTTCCCTCTGGGGACTGTCCAACATCAGGCACACATTCTGGAAACGGGACGAATGGCG
TATTAGAAAGCTTCCCGCCAACCCCGTTCTTTCAGTTTCAGGGCGAGATGGTTGTGAATGAACTGTACGT
TCCGTCCTCACCAGTCCACGGCCCCATGAGAAGCCGGAGCAAGTTGGTTTCCAGACCTTCTCGATCATTT
CTACTGAGACATCGCCCTGTACCAGAGATCCCAGGGTCTACAAAATCAATTCCAGGGAGCTATTTCCGTG
ACAGAAGAAGTAATACTACCTCAGCTGGAAAGTCTTTGACACTGAAAAATTCAAATGAGGATAATTCAAC
TTCCATCTTTCCTTACGGAGAGACATTTCTCTTCCAGAGACTAGAAAGTTCCAAGAAGCGATCTATAAAG
AATGAGTTTTGGCCGCATGAGAACACAGTTAAAGAGGAAGCAGCCACTACAAGAAACTCTATCCTAACCC
AGTCAAGCATATATGATAACAGGAAGGAAAAAGTGAGTGAAGACAAAGTCGAAGACATTTGGATACCCCG
CGAGGATAAAAATAACCTTGCACAGGATTCGGCTTCTGAGTCAGAATACTCCACAGTAGAGGAATGCTTC
CAGAGTTTAAGAAGAAAAAATTCTAAAGCGTCCAAGTCTAGGACTCAAAAAGCCTTCTACTTGGACCCCT
TCAATAGGCACAGTTATCCTTTAAGCTCCACGAGTGGAAATACTGAACCGTCATCAACCATCTCAAATGC
CATCTCTCCCTATGCCTGCTTCTATGGATCTTCAGCAGCCAAGGAGAAATGTGGATGGCTGGACAAACTC
TCTCCTCAAGGAAAACGCATGTTTCAGAAGAGATGGGTGAAATTTGATGGCCTTAGCATTTCTTACTACA
ATAATGACAGAGAGATGTACTCAAAAGGAATAATTCCCCTCACGGCGATATCCACAGTCCGGGCTCAAGG
AGACAACAAATTTGAAATTGTTACAACACAAAGGACTTTTGTTTTTAGAGTAGAAAAAGAAGAAGAGAGA
AATGATTGGATTAGCATATTATTAAGTGCACTGAAGTCACCATCACTTGCATCACAGTTGCAAGCAGCTG
TAGCCCCTGAGAAATGTGGATATCTTGAATTGAGAGGGTATAAAGCCAAAATTTTTACCGTGTTAAGGGG
CAACAGTGTGTGGCTTTGCAAAAATGAACAGGATTTTAAGAGTGGACTCGGTATTACCATAATTCCCATG
AATGTTGCAAATGTGAAGCAAGTAGATCGAGCTGTGAAACAGTCTTTTGAGATAATTACTCCCTACCGGA
GTTTCAGCTTCACAGCAGATTCGGAGAGAGAGAAACAGGAGTGGATTGAAGCTGTGCAGCAGTCAATAGC
AGAGACTCTCTCTGATTATGAAGTGGCGGAGAAGATTTGGTTTAATGAGTCCAACAGGAGCTGTGCAGAT
TGTAAAGCCCCAGATCCTGACTGGGCATCCATCAATCTCTGTGTCGTCATCTGTAAGAAGTGTGCAGGAC
AACATAGATCGTTGGGACCAAAAGACTCTAAAGTTAGAAGTCTGAAAATGGATGCCAGTATTTGGAGCAA
TGAGCTCATTGAGCTATTTATTGTCATTGGAAACAAGAGAGCAAATGACTTTTGGGCTGGAAACCTTCAA
AAAGACGAAGAATTACAGGTGGATTCCCCAGTGGAAAAGAGAAAAAACTTTATTACCCAGAAATACAAAG
AAGGAAAATTTAGAAAGACTCTCTTAGCATCTCTGACTAAAGAAGAGTTAAATAAGGCTCTGTGTGCTGC
AGTTGTGAAGCCAGATGTGCTGGAAACAATGGCCCTGCTGTTCAGTGGAGCAGATGTCATGTGTGCGACA
GGAGACCCCGTGCACAGTACCCCCTACCTGCTGGCCAAGAAGGCTGGGCAGAGTCTGCAGATGGAATTTC
TCTACCATAACAAGTTCTCAGATTTTCCTCAGTACGATGCTCATTTTGAGGGAGGGTCAAGTCAGGATGC
TGCCCAATCCTCCTTCCTCTGCGACTTCTTATACCAGACTGCTGCCGCTGCCTCTCGGGTCTCCTCGGAG
AAGAAGCTTCTTGAAGACACAAATAAAAAATGGTGTGTTTTGGAAGGCGGCTTCTTGAGTTACTATGAAA
ACGACAGGTGCACCACACCTAATGGTACCATTAATATCAGTGAAGTTATCTGCCTGGCTGTCCATAAGGA
GGACTTCTATCTGAATACTGGGCCCATCTTTGTCTTTGAAATCTACTTACCATCAGAACGTGTCTTTTTG
TTTGGAGCTGAAACATCTCAGATTCAAAGAAAATGGACAGAGACAATAGCCAAGCGTTTTGTTCCCTTTG
TTGCTGAAAACTTAACAGAAGCTGACTATGATCTGATTGGTCAACTCTTCTACAAAGACTGCCATGCCCT
GGACCAGTGGAGAAAAGGCTGGTTTGCTATGGACAAGTCTAGCTTGTGTTTTTGCCTTCAAACGCAAGAA
GCTCAGGAAGAGAGGATGAACCTAAGAAGACTGCAGGAGCTAACAATCAGCACAATGGTTCAAAATGGAG
AAAAAGTAGATGTGTTACTCTTGGTAGAAAAGGGGAGAACACTGTACATCCATGGGCACACCAAGTTGGA
TTTCACAGTCTGGCATACTGCAATTGAAAAAGCAGCAGGTACAGATGGTAACGCATTACAAGATCAGCAG
CTCTGCAAGAATGACGTCCCCATTATTGTGAACAGCTGCATAGCATTTGTTACACAGTATGGGTTAGGAT
GCAAATACATTTATCAAAAGGATGGTGATCCTTTGCACATAAGTGAACTCCTGGAGAGTTTCAAGAAGGA
TGCCAGGAGTGTTAAGTTGCGAGCTGGGAAACATCAACTTGAAGATGTGACAGGCGTGCTGAAGAGTTTT
CTGTCGGACATTGATGACGCTCTCCTCACGAAGGAGCTCTATCCATACTGGGTCTCTGCATTAGATACAC
AAGATGAAAAGGAGAGAACTAGCAAGTACAGAGCCTTTATACGCTCTCTTCCTGGGGTCAACAGAGCAAC
ACTTGCGGCTCTAATTGAACACCTTTACAGGGTTCAGAAATGCTCAGAAATCAATCACATGAATGCCCAT
AACTTGGCAATGGTCTTTTCATCCTGCTTATTTCAAACTAAGGGACAAACTAGTGAAGAAGTCAATGTAA
TTGAAGATCTAATTAATAATTACGTGGAGATATTTGAGGTTAAAGAAGACCAAGTCAAACAAATGGACAT
AGAAAATAGCTTTATAACCAAGTGGAAAGACACTCAAGTGTCCCAGGCTGGAGACTTGTTAATTGAAGTG
TTTGTGGAAAGAAAGGAGCCAGACTGTAGTATTATAATCCGGATATCTCCTGTGATGGAAGCTGAAGAGT
TAACGAATGATATATTAGCGATAAAAAATATCATTCCTATGAAAGGGGATATTTGGGCCACCTTTGAAGT
CATTGAAAATGAAGAGCTAGAACGTCCACTTCACTACACAGAGAATGTGTTGGAGCAGGTGCTTCAGTGG
AGTTCATTAGCTGAGCCTGGTTCTGCGTATCTTGTGGTGAAGAGATTCTTAACCATTGACAGCATTAAAC
AGTGCAGAGAGAAAAGTATCAAAGAAGGCATCTTAAAACTCAAAGAAGAACCATCTAAAATACTGTCTGG
GAATAAATTTCAAGATCGATGTGTTGTTTTACGAGATGGGCATCTCTTTATTTACAAGGATCCAAAGAGC
AGCAAACACGACAAGATGTTTCCTCTTAGGGCGATGAAGTTTTATCTTGGTGTAAAAAAGAAAATGAAAC
CCCCAACAAGTTGGGGATTGACTGTGTATTCTGAAAAACATCACTGGCACCTGTGTTGTGACAGTTTACA
AGCCCAGATGGAGTGGATGGCCAGTATCTTCATTGCTCAGCATGAGAATGATATATGGCCGCCAGCTGGA
AAGGAACGGAAACGTTCAATAACCAAAAATCCCAAGATTGGAGGTTTACCTCTGATTCCTATCCAACATG
AGAGAAATGCGACCCAGGCCCGTAAGAATATTGAGACGGCCAGAGCAGAGCTTGAAAGGCTGCGGCTGAG
TGAAAAGCACGATCCTCGAGACTTTACGGACTCCAGCTTAAAAGACCGAGCCTCCCTCATAGCCCACTGC
TTGGAGCACAAGGATGAGAAACTCCGAAATCGTGCCAGAAAACATCGCAGTTTCAACTGCCTGGAAGACA
CCGAGGCAGAGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGTCCGAAGACACTGAAGAAGACAGAGGA
AAGAAACAGCAAAGCTACCTTAGACGCAGATCCTAAGCTGCCATCGAAGGTCATCGAGGAACTCAGTGTG
GTTCTCCAGAGGTCACGACCCCTTCACAAAGAGCTACCGGATGAACAGACGCTACAGAAAGAAGTAAAAT
AA

Translation (1703 aa):
MSSVSEVNADIRDFLMSINLEQYLLHFREFGFYTVRDCTSINDSVLHQIGISPTGHRRRILKQLQMIFSK
MQDFPIYANVHKAKNGSTTKEQQHSDPSSSTHTGIECSDSITVHRPGPAPSEMVTTSTLSEGNCQSPKSH
DKLCLSSHDLLCPEEELHQNVDSSKDSLFGGVNVKIDPLITKRAVEYTAGEEHTEKGNLTSEDSSKALST
NTECLPSGDCPTSGTHSGNGTNGVLESFPPTPFFQFQGEMVVNELYVPSSPVHGPMRSRSKLVSRPSRSF
LLRHRPVPEIPGSTKSIPGSYFRDRRSNTTSAGKSLTLKNSNEDNSTSIFPYGETFLFQRLESSKKRSIK
NEFWPHENTVKEEAATTRNSILTQSSIYDNRKEKVSEDKVEDIWIPREDKNNLAQDSASESEYSTVEECF
QSLRRKNSKASKSRTQKAFYLDPFNRHSYPLSSTSGNTEPSSTISNAISPYACFYGSSAAKEKCGWLDKL
SPQGKRMFQKRWVKFDGLSISYYNNDREMYSKGIIPLTAISTVRAQGDNKFEIVTTQRTFVFRVEKEEER
NDWISILLSALKSPSLASQLQAAVAPEKCGYLELRGYKAKIFTVLRGNSVWLCKNEQDFKSGLGITIIPM
NVANVKQVDRAVKQSFEIITPYRSFSFTADSEREKQEWIEAVQQSIAETLSDYEVAEKIWFNESNRSCAD
CKAPDPDWASINLCVVICKKCAGQHRSLGPKDSKVRSLKMDASIWSNELIELFIVIGNKRANDFWAGNLQ
KDEELQVDSPVEKRKNFITQKYKEGKFRKTLLASLTKEELNKALCAAVVKPDVLETMALLFSGADVMCAT
GDPVHSTPYLLAKKAGQSLQMEFLYHNKFSDFPQYDAHFEGGSSQDAAQSSFLCDFLYQTAAAASRVSSE
KKLLEDTNKKWCVLEGGFLSYYENDRCTTPNGTINISEVICLAVHKEDFYLNTGPIFVFEIYLPSERVFL
FGAETSQIQRKWTETIAKRFVPFVAENLTEADYDLIGQLFYKDCHALDQWRKGWFAMDKSSLCFCLQTQE
AQEERMNLRRLQELTISTMVQNGEKVDVLLLVEKGRTLYIHGHTKLDFTVWHTAIEKAAGTDGNALQDQQ
LCKNDVPIIVNSCIAFVTQYGLGCKYIYQKDGDPLHISELLESFKKDARSVKLRAGKHQLEDVTGVLKSF
LSDIDDALLTKELYPYWVSALDTQDEKERTSKYRAFIRSLPGVNRATLAALIEHLYRVQKCSEINHMNAH
NLAMVFSSCLFQTKGQTSEEVNVIEDLINNYVEIFEVKEDQVKQMDIENSFITKWKDTQVSQAGDLLIEV
FVERKEPDCSIIIRISPVMEAEELTNDILAIKNIIPMKGDIWATFEVIENEELERPLHYTENVLEQVLQW
SSLAEPGSAYLVVKRFLTIDSIKQCREKSIKEGILKLKEEPSKILSGNKFQDRCVVLRDGHLFIYKDPKS
SKHDKMFPLRAMKFYLGVKKKMKPPTSWGLTVYSEKHHWHLCCDSLQAQMEWMASIFIAQHENDIWPPAG
KERKRSITKNPKIGGLPLIPIQHERNATQARKNIETARAELERLRLSEKHDPRDFTDSSLKDRASLIAHC
LEHKDEKLRNRARKHRSFNCLEDTEAEGPHGLPKAYKGPKTLKKTEERNSKATLDADPKLPSKVIEELSV
VLQRSRPLHKELPDEQTLQKEVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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