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Scores
10
9
8
7
6
5
4
3
2
1
0
-1
-2
-3
-4
-5
-6
-7
-8

   pfam02340 : PRRSV putative envelope protein. This family consists of ...

          
to position on
table  those positions where the is

Master: gi 81922060View Master in CD
Click on any consensus position for a detailed view of that column.
 
Click on any frequency bar to display detailed frequency data

Consensus Sequence - most freqently occurring residue at each position
1
M
2
P
3
S
4
L
5
S
6
S
7
L
8
C
9
P
10
W
11
L
12
I
13
S
14
W
15
F
16
S
17
L
18
P
19
F
20
C
Master Sequence - gi 81922060
19
M
20
L
21
S
22
R
23
S
24
S
25
W
26
C
27
P
28
L
29
L
30
I
31
S
32
L
33
Y
34
F
35
W
36
P
37
F
38
C
                                       
MHLFSSWCPWLIFWFFWPFC
TPSYNLLFVYMTSPYSLAYF
LRARTAMLAFIVLLWYFVWA
ILILATFMILFLMFLTIILL
VEMMDDIYTSVMTYHAMSHV
AKTWEEVIEAAFYMILYTIY
FMFHGGYVKHCAAAMMVCMI
QQNIHIAALITCIIVNCEVM
SYVKKKCSMMWSNQAWTGAS
CACVQMTTQTYYVTCCAKCT
EFDARNHWSCKDCVKDHLKW
HIEECQKHCEQEDCQEKMNG
KNGQMVQDDKRKEERGQQQH
NSHSPCREFNSNGGSHRDRD
RTKTYFSGGQDPHHTISFSE
WVPCFHEKHREQKKDKEHTK
YCQNIPGNNVGRPREQGNDN
DDRDLRNPRDHWQSGRNREP
GGYGVYPQYGNGRDNVPYGQ
PWWPWWDRWPPHWNPPDWPR