Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK000030 Gold_bad 2 786 502 285 12 4 26539349 26561237
AK000030 Gold_dubious 1 786 1 526 5 10 133613069 133612544
AK023981 Gold_dubious 1 1719 1 1719 38 10 73338096 73339811
AK094284 Gold_dubious 1 1853 1 1853 38 10 74343648 74341796
AK097584 Gold_dubious 1 1688 58 1631 29 10 133770363 133768736
AK124186 Gold_dubious 1 2007 1 2007 35 10 134668392 134670397
AK125237 Gold_bad 1 2222 1163 33 0 2 161738244 161738212
AK125237 Gold_bad 1 2222 1857 75 5 5 54920043 54919967
AK125237 Gold_dubious 4 2222 1 643 1 10 27551697 27581759
AK126007 Gold_dubious 2 3218 1 440 0 10 46973164 46969500
AK128491 Gold_bad 1 4174 2191 30 0 4 84870241 84870271
AK128491 Gold_bad 1 4174 2298 33 0 15 33360170 33360203
AK128491 Gold_dubious 1 4174 2069 41 1 10 111385718 111385759
AK130427 Gold_dubious 2 1700 1 1700 35 10 14041740 14040034
BC022263 Gold_dubious 6 1026 1 592 2 10 51989988 51940588
BC030097 Gold_dubious 1 830 1 829 13 10 69460053 69459225
BC047402 Gold_dubious 2 1616 1 1616 32 10 18947958 18945171