Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK022464 Gold_bad 2 1491 1 1297 40 16 78616562 78639747
AK027226 Gold_bad 1 1958 1 1958 78 16 33081619 33083581
AK097358 Gold_bad 3 2510 2 2509 213 16 35074735 35065757
AK123224 Gold_bad 8 2366 1 2361 81 16 30546935 30528232
AK127737 Gold_bad 4 3708 1 3708 314 16 35074565 35064717
BC017406 Gold_bad 1 465 2 464 16 16 52907635 52907172
BC028059 Gold_bad 6 1153 1 1153 35 16 1220175 1218337
BC029818 Gold_bad 3 397 1 397 12 16 31475769 31475111
BC031025 Gold_bad 1 1219 1 1219 37 16 11268541 11269755
BC040830 Gold_bad 1 417 368 50 0 17 19511350 19511301
BC040830 Gold_bad 6 417 18 365 23 16 1939228 1952536
BC051852 Gold_bad 5 1146 1 1146 35 16 1219957 1218338
BC062540 Gold_bad 1 2222 1958 42 1 6 90170725 90170684
BC062540 Gold_bad 3 2222 509 1416 165 16 35069032 35075957