Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK021435 Gold_dubious 1 1179 1 1179 34 19 61480916 61479737
AK021856 Gold_dubious 2 1496 1 1506 32 19 16609917 16603702
AK022418 Gold_dubious 1 2005 1 2005 39 19 19730185 19728183
AK024407 Gold_dubious 2 2345 41 2305 40 19 58388375 58359220
AK074568 Gold_dubious 5 1717 1 675 0 19 61571515 61578123
AK091021 Gold_dubious 2 2840 1 2840 46 19 14161570 14166062
AK093750 Gold_dubious 1 2247 1 2247 39 19 49324447 49326693
AK096402 Gold_dubious 1 3128 1 3128 57 19 23085578 23088705
AK097291 Gold_dubious 1 1799 2 1798 30 19 44673556 44675351
AK098080 Gold_dubious 2 2887 2 2885 67 19 12162794 12165786
AK098813 Gold_bad 1 1656 1 827 4 19 58690138 58690963
AK098813 Gold_dubious 2 1656 695 962 39 19 58608150 58689709
AK123399 Gold_dubious 2 2237 2 2159 46 19 49038051 49040235
AK126984 Gold_dubious 1 3553 1 3553 99 19 46026733 46030285
AK128845 Gold_dubious 5 3582 1 3133 54 19 56543596 56540240
AK128866 Gold_bad 1 2163 225 824 22 19 52605534 52604709
AK128866 Gold_dubious 2 2163 1 1520 20 19 52608705 52606928
AK130751 Gold_bad 1 2208 1754 214 1 19 39389382 39389596
AK130751 Gold_bad 1 2208 1959 250 0 7 127849559 127849809
AK130751 Gold_dubious 1 2208 1 437 1 19 16533639 16533203
AL832869 Gold_dubious 2 2865 1 1529 0 19 12600148 12601684
BC014144 Gold_dubious 9 1891 1 1891 38 19 11452796 11424304
BC020816 Gold_dubious 1 708 1 708 12 19 16324993 16324285
BC035367 Gold_dubious 9 852 1 852 13 19 57082908 57050869
BC035885 Gold_dubious 1 962 12 959 17 19 60154814 60155773
BC036591 Gold_dubious 1 2071 5 2071 36 19 16514557 16516625
BC039403 Gold_dubious 1 629 1 629 12 19 21266428 21265803
BC041615 Gold_dubious 4 637 1 636 10 19 62885225 62961518
BC041949 Gold_dubious 6 1747 1 1747 32 19 41514460 41502460
BC047520 Gold_dubious 4 989 1 988 15 19 13703576 13708840
BC054012 Gold_dubious 1 240 4 133 0 19 40723600 40723468
BC061910 Gold_dubious 1 975 1 975 15 19 58636995 58637970
BX647933 Gold_dubious 5 603 1 603 15 19 18981780 18973438