Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK128489 Gold_bad 1 3263 1470 39 1 2 58061787 58061826
AL049918 Gold_bad 1 2774 140 50 2 2 236639478 236639528
AL049918 Gold_bad 1 2774 989 34 1 18 8912388 8912355
AL049918 Gold_bad 1 2774 1494 48 2 9 95048004 95048052
BC027960 Gold_bad 7 2508 1 988 40 2 234127615 234205511
BC028338 Gold_bad 2 363 7 78 15 2 47286660 47307793
BC029452 Gold_bad 8 1050 1 927 34 2 167244080 167323050
BX649136 Gold_bad 4 5445 1 5442 204 2 91722035 91727490