Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK000586 Gold_dubious 8 1544 3 1542 45 20 55733779 55779360
AK001840 Gold_dubious 2 1691 1 1691 43 20 40294818 40298242
AK027173 Gold_dubious 2 1794 1 1573 30 20 3987309 3964857
AK027893 Gold_dubious 3 1346 1 308 0 20 32046937 32031373
AK056260 Gold_dubious 1 1984 1 1984 36 20 3844296 3846281
AK096307 Gold_dubious 3 1888 1 850 2 20 32047479 32031373
AK097059 Gold_dubious 4 1987 1 385 0 20 32046927 32031373
AK097528 Gold_bad 2 2995 1328 1291 37 20 55776144 55792938
AK097528 Gold_dubious 2 2995 1 1839 12 20 55782730 55784803
AK128103 Gold_dubious 1 3211 2850 362 1 20 47208892 47208531
AL832097 Gold_dubious 1 2769 1 1605 1 20 61838114 61839718
BC000628 Gold_dubious 3 1332 1 294 0 20 32046923 32031373
BC003675 Gold_dubious 2 220 1 203 5 20 44861469 44859771
BC047440 Gold_dubious 3 1457 1 422 1 20 32047051 32031373
BC056916 Gold_bad 1 1644 1133 33 0 11 68749400 68749368
BC056916 Gold_dubious 1 1644 1268 36 1 20 5635541 5635577
BX648024 Gold_dubious 17 3712 1 3711 66 20 34885966 34861941