Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK057957 Gold_dubious 3 1915 1 1915 43 21 38583370 38611657
AK074662 Gold_dubious 2 3179 1 3179 57 21 43083733 43089673
BC017024 Gold_dubious 4 2015 1 1930 42 21 10120823 10079192
BC037276 Gold_dubious 4 1298 6 1081 20 21 10049386 10042392
BC051807 Gold_bad 1 1637 765 873 12 21 45204924 45205796
BC051807 Gold_dubious 1 1637 1 930 17 21 45204243 45205176