Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK000016 Gold_dubious 1 834 1 834 15 5 30001048 30001883
AK024538 Gold_dubious 1 179 1 84 0 5 113994391 113994474
AK026267 Gold_dubious 2 1095 4 1095 21 5 180453586 180454268
AK091812 Gold_dubious 1 1889 1 1889 29 5 38874068 38872180
AK093716 Gold_dubious 1 1929 1 1929 38 5 134160960 134162886
AK094260 Gold_dubious 1 1872 1 1871 30 5 11872726 11870855
AK096220 Gold_dubious 8 2872 14 2836 61 5 876949 763213
AK125293 Gold_bad 1 2139 1400 33 1 3 143921800 143921768
AK125293 Gold_bad 1 2139 1439 30 0 19 53978556 53978527
AK125293 Gold_dubious 1 2139 1307 30 0 5 23205789 23205760
AK125735 Gold_bad 1 1436 1336 101 3 5 75110872 75110973
AK125735 Gold_dubious 5 1436 1 1057 20 5 75097538 75112756
AK128694 Gold_dubious 3 4067 1 4067 109 5 38869048 38864983
AK129636 Gold_bad 1 1646 1370 277 10 5 132329915 132329639
AK129636 Gold_bad 2 1646 442 935 22 5 132331048 132316505
AK129636 Gold_dubious 1 1646 1 309 1 5 132317287 132316979
AK129721 Gold_dubious 1 2441 1 2441 57 5 132373494 132371053
AL831864 Gold_dubious 2 2462 1 2462 55 5 1519680 1514283
BC017904 Gold_dubious 1 871 1 871 15 5 118540113 118540983
BC026956 Gold_dubious 8 2443 1 2443 59 5 149241088 149255777
BC039501 Gold_dubious 2 1287 166 1122 24 5 167068381 167061129