Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK095684 Gold_partial 14 2347 1 2311 5 X 98847249 98867779
BC034936 Gold_good 5 2110 1 2092 13 X 151376836 151384680
BC038597 Gold_partial 3 2660 12 2626 4 X 18278609 18282770
BC042166 Gold_good 5 2110 1 2092 13 X 151376836 151384680