Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK001091 Gold_excellent 7 1737 1 1737 6 2 11317321 11340726
AK001500 Gold_excellent 6 2615 1 2615 5 8 144796857 144791219
AK001626 Gold_excellent 12 2160 1 2160 4 5 168118874 168074126
AK002153 Gold_excellent 15 1768 1 1768 3 2 184031961 183992847
AK002203 Gold_excellent 16 1634 1 1634 1 2 169861672 169924108
AK023163 Gold_excellent 5 2174 16 2175 2 3 14683425 14689166
AK023300 Gold_excellent 10 1667 1 1667 5 2 110392558 110462412
AK023317 Gold_excellent 2 2736 1 2736 4 5 137829104 137972967
AK023639 Gold_excellent 7 2472 1 2471 3 6 71231088 71262995
AK025200 Gold_excellent 3 2176 3 2186 4 17 37384951 37381885
AK026247 Gold_partial 2 1252 1 1237 2 17 17289440 17271826
AK027227 Gold_partial 2 2183 1 2150 8 21 45423341 45421114
AK054706 Gold_excellent 2 2545 1 2545 5 11 131819109 131821742
AK055316 Gold_excellent 3 2200 1 2200 6 17 44173134 44184730
AK056509 Gold_excellent 16 3076 1 3075 5 16 21128687 21081776
AK056511 Gold_excellent 3 2976 1 2969 1 2 241821248 241782096
AK057925 Gold_partial 4 744 16 729 0 5 133823788 133813990
AK057984 Gold_excellent 2 1767 1 1767 1 17 76161900 76156573
AK074312 Gold_excellent 10 2051 17 2046 7 3 47420927 47415794
AK074346 Gold_excellent 16 2764 21 2760 6 17 73556255 73543965
AK074347 Gold_excellent 10 2155 21 2154 3 22 44883393 44902139
AK074364 Gold_excellent 5 2594 16 2596 8 19 17442337 17471207
AK074369 Gold_excellent 8 2098 15 2098 2 17 4127597 4115904
AK074373 Gold_excellent 9 2686 1 2702 7 2 64753352 64793800
AK074378 Gold_excellent 15 2305 5 2321 7 1 165093292 165220294
AK091415 Gold_excellent 3 3057 1 3057 10 14 102140393 102136207
AK094252 Gold_excellent 2 1998 1 1998 5 9 90947210 90943575
AK094940 Gold_excellent 10 3769 16 3771 8 6 53422082 53408975
AK095583 Gold_excellent 2 3604 1 3602 2 7 73857719 73853799
AK095583 Gold_excellent 2 3604 1 3602 2 7 74412866 74416787
AK098364 Gold_excellent 4 1969 1 1969 4 10 79124534 79094975
AK098722 Gold_excellent 2 1308 1 1308 2 19 5407866 5406412
AK098728 Gold_excellent 3 2414 1 2414 1 9 131231332 131235957
AK123559 Gold_good 5 3708 14 3695 34 19 5862702 5866820
AK123778 Gold_excellent 2 2528 2 2527 3 17 49030390 49027818
AK124271 Gold_excellent 13 2010 1 2001 5 9 131997082 131977257
AK124777 Gold_good 2 3638 1 3612 20 9 131912375 131908658
AK125109 Gold_excellent 5 3253 5 3249 6 14 72756808 72750798
AK125254 Gold_excellent 2 2094 1 2094 3 17 38890072 38894110
AK127786 Gold_good 9 3813 16 3813 17 3 9622712 9852088
AK128479 Gold_excellent 10 1264 1 1264 0 7 1261589 1256295
AK128756 Gold_excellent 2 1927 1 1927 1 9 66086417 66083879
AK130216 Gold_good 2 715 1 715 5 9 2164924 2163967