Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
BC002783 Gold_dubious 4 1536 9 1455 23 9|NT_078081 34796 80376
BC004542 Gold_dubious 4 2139 1109 1040 1 22 48897363 48895442
BC005382 Gold_dubious 2 440 1 440 8 X 139480257 139479171
BC009017 Gold_dubious 3 664 1 664 13 1 150777280 150775658
BC010437 Gold_dubious 5 2780 1 2642 41 2 170793066 170809543
BC012036 Gold_dubious 2 1063 1 1063 21 18 19876126 19877220
BC012205 Gold_dubious 5 776 1 776 19 4 84489391 84470240
BC012362 Gold_dubious 6 1913 1 1910 38 3 154200968 154234099
BC012372 Gold_dubious 6 732 1 732 18 6 32073055 32074626
BC012835 Gold_dubious 4 1538 1 1465 33 9|NT_078081 34786 80376
BC014144 Gold_dubious 9 1891 1 1891 38 19 11452796 11424304
BC016929 Gold_dubious 6 1326 1 1326 22 6 31475556 31487236
BC017443 Gold_dubious 14 2744 1 1366 14 7 129769798 129699375
BC017652 Gold_dubious 5 1195 1 1195 20 2 37400185 37404322
BC017907 Gold_dubious 1 1351 1091 261 2 2 240043983 240044243
BC020756 Gold_dubious 6 983 1 980 27 17 62447360 62426124
BC021247 Gold_dubious 6 4009 2004 2015 3 1 28503193 28514331
BC028035 Gold_dubious 3 2371 7 714 1 22 42051852 42101783
BC029266 Gold_bad 2 3230 1 157 0 1 28300922 28338663
BC029266 Gold_dubious 5 3230 1901 1330 1 1 28503193 28511553
BC029568 Gold_dubious 6 1136 172 965 24 4 191167442 191193899
BC032340 Gold_dubious 3 1271 1 299 0 X 2014109 1921916
BC032340 Gold_dubious 3 1271 1 299 0 Y 2014109 1921916
BC032427 Gold_dubious 3 2369 1 458 0 1 25420343 25438287
BC032544 Gold_dubious 3 1939 12 359 0 1 45586232 45573280
BC032654 Gold_dubious 23 3950 12 3947 71 4 77108254 77193759
BC033064 Gold_dubious 5 1052 1 1052 23 12 47945156 47953381
BC033389 Gold_bad 1 1421 102 73 4 7 57489014 57488941
BC033389 Gold_dubious 2 1421 174 1248 32 4 191168036 191169917
BC034024 Gold_dubious 1 1154 1 1154 27 1 141937918 141936765
BC038998 Gold_dubious 10 1353 9 1353 22 X 145661193 145682893
BC040074 Gold_dubious 2 2607 1 871 0 7 288196 290815
BC041615 Gold_dubious 4 637 1 636 10 19 62885225 62961518
BC047440 Gold_dubious 3 1457 1 422 1 20 32047051 32031373
BC048328 Gold_dubious 11 1718 1 1718 39 2 114436847 114451759
BC048328 Gold_dubious 11 1718 1 1718 40 15 100237097 100252030