Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK023392 Gold_dubious 7 1782 1 1782 34 X 1166269 1179776
AK023392 Gold_dubious 7 1782 1 1782 34 Y 1166269 1179776
AK054709 Gold_dubious 2 1779 1 1790 29 16 21410360 21406143
AK054709 Gold_dubious 2 1779 1 1790 29 16 21842636 21838423
AK054709 Gold_dubious 2 1779 1 1790 29 16 22484292 22488509
BC009269 Gold_dubious 2 1146 1 161 0 X 1938459 1921916
BC009269 Gold_dubious 2 1146 1 161 0 Y 1938459 1921916
BC015400 Gold_dubious 3 648 1 648 15 2 114450210 114451756
BC015400 Gold_dubious 3 648 1 648 15 15 100250482 100252027
BC019696 Gold_dubious 3 1271 5 284 0 X 2014094 1921916
BC019696 Gold_dubious 3 1271 5 284 0 Y 2014094 1921916
BC032340 Gold_dubious 3 1271 1 299 0 X 2014109 1921916
BC032340 Gold_dubious 3 1271 1 299 0 Y 2014109 1921916
BC048328 Gold_dubious 11 1718 1 1718 39 2 114436847 114451759
BC048328 Gold_dubious 11 1718 1 1718 40 15 100237097 100252030
BC062672 Gold_dubious 2 616 5 615 12 X 139366672 139029201
BC062672 Gold_dubious 2 616 5 615 12 X 139480435 139479173