Legend : mRNA The GenBank/DDBJ/EMBL accession.
Method The method or program, or GOLD.
#Exon The number of exons in the alignment.
Length The length of the cDNA to be aligned; i.e. the length of the accession minus the eventual poly A and vector.
From The first base aligned, in coordinate on the accession as it is in GenBank.
Aligned The total number of bases aligned, not the last base of the alignment!
#err The number of point differences from the genome, as measured by Smith Waterman.
Chrom The chromosome number (or NT_ contig if unmapped).
from The beginning of the alignment on the genome, in basepairs, calling 1 the first base.
to The end of the alignemnt. If End < From, the cDNA aligns on the minus strand.

mRNA Method #Exon Length From Aligned #err Chrom from to
AK026570 Gold_partial 5 628 154 475 0 15 80540677 80536983
AK026570 Gold_partial 5 628 154 475 0 15 80935020 80931326
BC005128 Gold_partial 7 873 16 858 0 9 131491821 131494325
BC005128 Gold_partial 7 873 16 858 0 9|NT_079538 14146 16650
BC014636 Gold_partial 6 1570 392 1179 1 X 123066 113606
BC014636 Gold_partial 6 1570 392 1179 1 Y 123066 113606
BC025719 Gold_partial 7 1230 184 1047 0 1 1579676 1581546
BC025719 Gold_partial 7 1230 184 1047 0 1|NT_077964 48499 50369
BC035595 Gold_partial 2 253 16 246 3 1 1216595 1216144
BC035595 Gold_partial 2 253 16 246 3 1|NT_079486 189559 190010