Bioseq-set
Defined in file seqset.asn
C++ class: CBioseq_set
Bioseq-set ::= SEQUENCE { -- just a collection
id Object-id OPTIONAL ,
coll Dbtag OPTIONAL , -- to identify a collection
level INTEGER OPTIONAL , -- nesting level
class ENUMERATED {
not-set (0) ,
nuc-prot (1) , -- nuc acid and coded proteins
segset (2) , -- segmented sequence + parts
conset (3) , -- constructed sequence + parts
parts (4) , -- parts for 2 or 3
gibb (5) , -- geninfo backbone
gi (6) , -- geninfo
genbank (7) , -- converted genbank
pir (8) , -- converted pir
pub-set (9) , -- all the seqs from a single publication
equiv (10) , -- a set of equivalent maps or seqs
swissprot (11) , -- converted SWISSPROT
pdb-entry (12) , -- a complete PDB entry
mut-set (13) , -- set of mutations
pop-set (14) , -- population study
phy-set (15) , -- phylogenetic study
eco-set (16) , -- ecological sample study
gen-prod-set (17) , -- genomic products, chrom+mRNA+protein
wgs-set (18) , -- whole genome shotgun project
named-annot (19) , -- named annotation set
named-annot-prod (20) , -- with instantiated mRNA+protein
read-set (21) , -- set from a single read
paired-end-reads (22) , -- paired sequences within a read-set
small-genome-set (23) , -- viral segments or mitochondrial minicircles
other (255) } DEFAULT not-set ,
release VisibleString OPTIONAL ,
date Date OPTIONAL ,
descr Seq-descr OPTIONAL ,
seq-set SEQUENCE OF Seq-entry ,
annot SET OF Seq-annot OPTIONAL }