3LHR,1Y7Q,2FI2


Conserved Protein Domain Family
SCAN

?
pfam02023: SCAN 
Click on image for an interactive view with Cn3D
SCAN domain
The SCAN domain (named after SRE-ZBP, CTfin51, AW-1 and Number 18 cDNA) is found in several pfam00096 proteins. The domain has been shown to be able to mediate homo- and hetero-oligomerization.
Statistics
?
PSSM-Id: 460417
Aligned: 176 rows
Threshold Bit Score: 72.5209
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3LHR_A          5 PEIFRQRFRQFGYQDSPGPREAVSQLRELCRLWLRPE--THTKEQILELVVLEQFVAILPKELQTWVRDHHPENGEEAVT 82 
3_pfamImport    1 PEAYRQKFRGFTKSSEESFIEFAREKEQLFDRWCVSTgvERNFDKLKQLVLMEEFKSCVSKQIRLFLEEKQVVDLETAAK 80 
XP_011229961  102 SEFQDSQHSLFQDGNNSHAKQELQRLYKSFYSWLQPE--KHSKDEIIFQVVLEQFMINRHCSGRSTLKKKWESSGRNLEK 179
Q8NAM6         40 SEFSRMVLNSFQDSNNSYARQELQRLYRIFHSWLQPE--KHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLER 117 human
9_pfamImport    1 EETYRQRFRSTKKKEGQSYVEVGIQLMDLFRKWTASA--KDSVAELTELVVLEQLLNTMPTELQVWIREKKLKTVEEAAT 78 
12_pfamImport   1 PEAYRLRFRSWRKGEKQTYTEVARELYSHFNRWCSAVg-VTTFEELSNLIVLEQFRNILPERVATHIFEHKMKTAAEAAV 79 
XP_002408862  107 TEAFRQRFRGDTKKTEQSFTEFAYSLRSNLVEWLKSAevYGDHDRIVECIGLEQLCKCMPETVRFWVQDKVPETTQKAAE 186
XP_011405491   50 EETYRQRFRSAHIKRTETPLEMLTRITDLADKWLVS---CTTRKEVIDCVILEQFVNVLPEEARTCVKEHKPSSSKEAGQ 126
XP_006809460   24 PETYRQRFRCLEVF-DESPKELYARLKELYEKWIQPK--NRTIKEVGEIIILEQFLRMLYPELQVWIKEHNPKSAAEAAT 100 Neolamprologus...
XP_025277607   26 SEFKDTQNSLFQNGNNSHAKQELQRLYKSFYFWLQPE--KHSKDEIIFQVVLEQFMINRHCSDRSTLKNKWESSGRNLEK 103 dingo
3LHR_A         83 VLEDLESELDD 93 
3_pfamImport   81 LAEEYVLTHTQ 91 
XP_011229961  180 FMESLSESSLK 190
Q8NAM6        118 FIEDLTDDSIN 128 human
9_pfamImport   79 QADDYLLARQG 89 
12_pfamImport  80 VADDFALTHNQ 90 
XP_002408862  187 LAEEYLSRRGS 197
XP_011405491  127 LAEDFRQARKD 137
XP_006809460  101 LADVFVAARNf 111 Neolamprologus brichardi
XP_025277607  104 FMEDLSDSSVK 114 dingo
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap