1IUF


Conserved Protein Domain Family
HTH_Tnp_Tc5

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pfam03221: HTH_Tnp_Tc5 
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Tc5 transposase DNA-binding domain
Statistics
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PSSM-Id: 460850
Aligned: 151 rows
Threshold Bit Score: 36.0696
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1IUF_A                82 YPLLEAALFEWQVQ----QGDDATLSGETIKRAAAI-LwhkiPEYQDQPVPNFSNGWLEGFRKRH--ILH 144  fission yeast
CAQ35050              72 YADVDLQVNKEIVRr---QNKGERLTNPWIKEYAQY-VayqlHPEIPDIAKFFDANWLYRFKRRY--CVE 135 
jgi:OSTLU_119479     227 LDQLAKIVKHYIR-------VGISLSQETILSMAKN-Fyr-dEHHADPSDKTFGSAWFYRFLNRH--GID 285 
Q2H0C3               649 FSRLESELAEYVRVq---RTLGVEPTDADLQKQARMiIy--eLDDAWNQTAADDPIWLAAFKQRHvaGST 713  Chaetomium globo...
Q7S886               748 YSRLERELAEFLHLq---RSMGIEPTDMDLQTKARIiIy--eCDDCWNQTAADNSDWLAAFKQRHvsPEA 812  Neurospora crassa
XP_001957388         106 CAYINAVVYEWLVRaninPQLRGSITHGMIKDKAENa-----RQVIGSTSFIADNRWLNRFRETHlqGFA 170 
WGS:AAPP:GF24198-PA  106 MSAISFLLREWVERcr-qLHLNISITNQKLKDTALR-M----AAILNLPSFRPSYRWLNRFRGKY--KYE 167 
XP_001984637         111 MSAISFLLHEWVERcr-qLCLGVTIRNHTLKETALK-M----AAVLKLPAFRPSYRWLNRFRSKY--KYE 172 
WGS:AAPP:GF24076-PA  153 VSMLGKAVYDWIRRm--mYYKDFSISDGLIQKMALQ-F----KSSMGLAHFFPHQEWCDKFRRTY--RLN 213 
XP_001957390         110 LRFLGHCLYEYIQRa--qYYLNTEITEELIRNRAQD-F----RDLLRLEGFVPSKSWMNHFKAKF--NIT 170 
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