Conserved Protein Domain Family
DUF1199

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pfam06712: DUF1199 
Protein of unknown function (DUF1199)
This family consists of several hypothetical Feline immunodeficiency virus (FIV) proteins. Members of this family are typically around 67 residues long and are often annotated as ORF3 proteins. The function of this family is unknown.
Statistics
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PSSM-Id: 115374
View PSSM: pfam06712
Aligned: 5 rows
Threshold Bit Score: 71.4754
Threshold Setting Gi: 82291380
Created: 22-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                       10        20        30        40        50
               ....*....|....*....|....*....|....*....|....*....|..
gi 82283709  1 MLPRNGDFVPDFIYRSNSIFTDSRRSGSMETSTISSPSRRIRNNFLGLLGTR 52
gi 141120    1 MLDRNSKSVLVAFYRSGNIFRYNQCSDSMETSTISSPSRRIRNNFLGLLGTR 52
gi 82291380  1 MLYRNSRSVLASIYRSRNIFGNSQSSGSMETSTISSPSRRIRNNFLGLLGTR 52
gi 82283698  1 MSHRNSGFVPA-FHRNNNIYTNNQGSGSMETSTIRSPRGRIRDNFLGLLGTR 51
gi 82291381  1 MLHRNNGVVPASIDRNNNIYANNPGSGSMETSTISSPSRRIRNNFLGLLGTR 52
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