Conserved Protein Domain Family
DUF1542

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pfam07564: DUF1542 
Domain of Unknown Function (DUF1542)
This domain is found in several cell surface proteins. Some are involved in antibiotic resistance and/or cellular adhesion.
Statistics
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PSSM-Id: 336743
View PSSM: pfam07564
Aligned: 125 rows
Threshold Bit Score: 34.0957
Threshold Setting Gi: 81674135
Created: 28-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81782497   619 LVNKAEVKLKEAHEATKQAIEKDPWLSPEQKKAQKEKAKARLDEGLKALKAADSLEILKVTeeafvdKEKNPDSIPNQHK 698
gi 81667861  2347 NKDVANAAIDNAVAGKLKEIQDP--LTTEEKQAYTDLINSEATNAKQNIANATTVEAVTTA------QTNGVNEITNTEI 2418
gi 81667861  4026 DKDVANAAIDNAVAGKLKEINDS--LTNEEKQAYTDLINNEADNAKQKIAEATTPEEVTRA------QEEGVKNINNINV 4097
gi 81667861  3126 AKEAAKKAVAEAAEAKNNAID-SSDLTNEEKAALKQEVADAQNAADRAIDAATTNTAVTEA------QDNGIKAIENVTV 3198
gi 75507554   711 VKEAAKKAVAEAATAKTNAID-SSNLTAEEKAALKQEVTEAQTAANTAIDNATTNADVTEA------KDKGIKAINGIEV 783
gi 81667861  1673 VKEAAKQAVADAATAKNQAID-ASNLTDEEKAALKQKVTDAQNAADQAIDNATTNAAVTEA------QTNGIKAINGIEV 1745
gi 81667861  1975 AKQAAKEAVAKAVDEKNAAID-SSNLTEEEKEALKQKVTEAQTAADQAIDNATTNAGVTEA------QTNGVNAINGIEV 2047
gi 81667861  2900 KQQEAIEELNVARDAKSSAIDNATDLTTDEKNSLKDKVQAEYSNAVSNITSATTDEAVTTA------KENGIAAIKDIQI 2973
gi 122539273 1350 IKTKAIADIEKAVKEKQQQIDNSLDSTDNEKEVASQALAKEKEKALAAIDQAQTNSQVNQA------ATNGVSAIKIIQP 1423
gi 122539561 8564 AKDKAIQSINQALANKLKEIEAS-NATDQDKLIAKNKAEELANSIINNINKATSNQAVSQV------QTAGNHAIEQVHA 8636

                  ...
gi 81782497   699 AGT 701
gi 81667861  2419 PTT 2421
gi 81667861  4098 PTT 4100
gi 81667861  3199 PTE 3201
gi 75507554   784 PNK 786
gi 81667861  1746 -TT 1747
gi 81667861  2048 PNK 2050
gi 81667861  2974 PTK 2976
gi 122539273 1424 ETK 1426
gi 122539561 8637 NEI 8639
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