5HSF,3LQZ


Conserved Protein Domain Family
C1-set

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pfam07654: C1-set 
Click on image for an interactive view with Cn3D
Immunoglobulin C1-set domain
Statistics
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PSSM-Id: 336758
View PSSM: pfam07654
Aligned: 73 rows
Threshold Bit Score: 61.8783
Threshold Setting Gi: 121039
Created: 26-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5HSF_A         11 VYTLPPSRDE-Lt-KNQVSLTCLVKGFYP--SDIAVEWESNGQPE-Nn-YKTTPPVLDSDGSFFLYSKLTVDKSRW-QQG 83
gi 408360260  112 VTLFLPSLKN-Lq-ANKATLVCLVSEFYP--GTLVVDWKVDGVPVtQg-VETTQPSKQTNNKYMVSSYLTLISDQW-MPH 185
gi 125897       8 LTVFPPSSEE-Lk-ENKATLVCLISNFSP--SGVTVAWKANGTPItQg-VDTSNPTKE-GNKFMASSFLHLTSDQW-RSH 80
gi 125139       7 VLIFPPAPAQ-La-TGAVTIVCVANKYFP---DGTVTWEVDGKPLtTgiETSKTPQNSDDCTYNLSSTLTLQKSNY-NSH 80
gi 1160421833   8 VFIFPPSDEQ-Lk-SGTASVVCLLNNFYP--REAKVQWKVDNALQsGnsQESVTEQDSKDSTYSLSSTLTLSKADY-EKH 82
gi 125144       7 VSIFPPSTEQ-La-TGGASVVCLMNNFYP--RDISVKWKIDGTERrDgvLDSVTDQDSKDSTYSMSSTLSLTKADY-ESH 81
gi 125146       7 VSIFPPSSEQ-Lt-SGGASVVCFLNNFYP--KDINVKWKIDGSERqNgvLNSWTDQDSKDSTYSMSSTLTLTKDEY-ERH 81
gi 121039     123 VFLFPPKPKDtLmiSRTPEVTCVVVDVSHedPEVKFNWYVDGVEVhN--AKTKPREEQYNSTYRVVSVLTVLHQDW-LNG 199
gi 121088     116 VFIFPPKPKDtLmiSRTPEVTCVVVDVSQddPEVQFTWYINNEQVrT--ARPPLREQQFNSTIRVVSTLPITHQDW-LRG 192
gi 135515      11 VSLFEPSKAE-IanKQKATLVCLARGFFP--DHVELSWWVNGKEVhSgvSTDPQAYKESNYSYCLSSRLRVSATFWhNPR 87
                          90
                  ....*....|..
5HSF_A         84 NVFSCSVMHEAL 95
gi 408360260  186 SRYSCRVTHEGn 197
gi 125897      81 NSFTCQVTHEGd 92
gi 125139      81 NEYTCQVAQGAg 92
gi 1160421833  83 KVYACEVTHQGL 94
gi 125144      82 NLYTCEVVHKTS 93
gi 125146      82 NSYTCEATHKTS 93
gi 121039     200 KEYKCKVSNKAL 211
gi 121088     193 KEFKCKVHNKAL 204
gi 135515      88 NHFRCQVQFHGL 99
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