Conserved Protein Domain Family
Secretin_N_2

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pfam07655: Secretin_N_2 
Secretin N-terminal domain
This is a short domain found in bacterial type II/III secretory system proteins. The architecture of these proteins suggest that this family may be functionally analogous to pfam03958.
Statistics
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PSSM-Id: 311544
View PSSM: pfam07655
Aligned: 56 rows
Threshold Bit Score: 38.8018
Threshold Setting Gi: 75376159
Created: 22-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123630848 160 TETIALNYLFLKRFGSSSTTINSGGVSENDPNSGNSSNGNss-nSNNSNSGSNNNQsgnngssnqnSGINLYTENESNFW 238
gi 81419744  192 TRVFQIYALPGTDALSSSVTATTSATFGSGVSEGDSGNSG--------------------------STQTLATSLTRSVM 245
gi 123027205 211 TRVYQVVAIPGDSK--LDTNVVSGASNSGGASSNGTGAAGgs-gAGGAGIGGGGGGtsgspsvssdNTANITMNAQLSVY 287
gi 123539646 513 TRTFQVNAIPGDSS--LNASVVSGATSDGTSGGSQSGGSGgg-iNGASGGTTGLTAn---------NTANTAVNSQLSVF 580
gi 75494190  184 TRTFRMYAFDDVNT--VDSTVRSGMTTAAGISGDGSGSTGqngsSGISGDSG--------------SKQTTSSELKTSIL 247
gi 123653539 219 TRTFDVWAFGDDQV--IESVVKSGLITSTGSGSNGSGGTS----SGTGASGDSG------------SNQSTTVQIKTSLL 280
gi 75502856  220 TKVFDVYAFGDVQE--IKSTVRSGMTTSSGSGSGSSSGSS----SGSSSSGVSGDSg---------SNQSTTVTLNTSIL 284
gi 500756224 211 TKRFDIDTTNAKYT--LENQQKSGLSTQSGSNGTGEK----------SSGISGTSG----------SNTLQTTEMSNDIY 268
gi 500756325 215 TQTFTVMAMPSATE--SSNTVKSGTNTSSGVSGANGTS------SGMSGDST--------------SNSTTSVTIKNDLL 272
gi 925236825  17 TRTFQVNAIPGDSS--LNASVVSGATSDGAAGGSQSGGSGg--sGGGINGAGSGTTglt-----anNTANTAVNSQLSVF 87
                         90       100
                 ....*....|....*....|....*.
gi 123630848 239 DELKESLTAFVGt-GEGrSVIVSPQA 263
gi 81419744  246 DEIQKTVSAMLTp-GEGkLTLSMATA 270
gi 123027205 288 NGLQTAIKAMLs--PAGsVITSPATG 311
gi 123539646 581 NGLQSAIQSMLs--RYGsSVSSPATG 604
gi 75494190  248 SDIENSINSMLTp-SMGrMSLSRATG 272
gi 123653539 281 SDIENNVKAMLStqPAGrIFLSRSTG 306
gi 75502856  285 TDIQSNVRAMLStsPPGrMYLSPSTG 310
gi 500756224 269 GDIQKTVESMLTp-GVGrVSINQTSG 293
gi 500756325 273 RDIEKNLRSMLTp-NVGrLSMSPSTG 297
gi 925236825  88 NGLQSAIQSMLs--RYGsSVASPATG 111
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