Conserved Protein Domain Family
M20_dimer

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pfam07687: M20_dimer 
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Peptidase dimerisation domain
This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the M20 family of peptidases. This family includes a range of zinc metallopeptidases belonging to several families in the peptidase classification. Family M20 are Glutamate carboxypeptidases. Peptidase family M25 contains X-His dipeptidases.
Statistics
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PSSM-Id: 311562
View PSSM: pfam07687
Aligned: 175 rows
Threshold Bit Score: 33.0882
Threshold Setting Gi: 81590956
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FNO_A       205 FENFNAASVNIKIVGNNVHPGtakgvxvnALSLAARIHAEVPADEAPETTEGYEGFyhlaSXKGTVDRAEXHYIIRdfdR 284
gi 81590838  208 LEVKNLCGGHSGAEIHKNRLN--------ANKVMSEVISEIKKNFDMKLCDIKGGS----KDNAIPRECYFDIAID---K 272
gi 81590830  212 LGVKNLIGGHSGMEIDKGRMN--------ANKILTELLVEVRKNFEIKLCSFKGGT----KENAIPRVAMVEVAVM---K 276
gi 81580639  207 LYVGGLKGGHSGMEIDKQRGN--------ANKVLGRVLRDLSAHTEFNISEVHGGL----KTNAIPRESVATLLIR---T 271
gi 81766669  206 IMLRGLKGGHSGMEIDKQRGN--------SNKLMGRVLNDINANCDIRLISINGGS----KVNAIPRECDTLLAVK---K 270
gi 81766590  205 LEILGFKGGHSGMEIHKQRGN--------ANKLMGRILYDLSKEVDFNIASIKGGS----KHNAIPQYCQSIIAVK---K 269
gi 81590956  209 IKISGLRGGHSGEDIHKGRAN--------ANVLLANLLNLLREKINFLISDLKGGN----FRLAIPREAHVTVALE---E 273
gi 81556204  197 ILFKGLKGGHSGADIHLDLAN--------SLKLMFFALFEIKANLNFEIEGIFGGN----SSNAIPIEAKALIFID---D 261
gi 81791310  207 IRVSGLRGGHSGMDIDLGRGN--------ANKIMNRLLQMGREHHGLLLASIDGGS----LRNAIPRESVALVAVP---S 271
gi 159109826 228 LHLSKLSGGHSGCDIHLYRAN--------TIKLMARLVSKIPG---ARLCALSGGS----AHNAIPGSCQAVITCR---- 288
                         90       100
                 ....*....|....*....|....*
1FNO_A       285 KQFEARKRKXXEIAKKVGKGLHPDC 309
gi 81590838  273 SSSQNFMNKSKEIFENFKSKYIEQD 297
gi 81590830  277 KGLKNFRIKLIEIMKNIIDKYILIE 301
gi 81580639  272 EDVGQVEEKLESWTRVLQEEMRAVD 296
gi 81766669  271 EDVKKLEELIQKWDSILKDEYHAND 295
gi 81766590  270 EEVEKVKEICTALEKDLKAEYRIGE 294
gi 81590956  274 KDIDILKNIVKNFESEAKKIYEETA 298
gi 81556204  262 NDYDLLNKELKLFVLKVKSAYS-LE 285
gi 81791310  272 AQKVAFLDELHSLASAIGLELNGVD 296
gi 159109826 289 --SDITPAHIAKIWDEIYIAYKPTD 311
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