Conserved Protein Domain Family
DUF1604

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pfam07713: DUF1604 
Protein of unknown function (DUF1604)
This family is found at the N-terminus of several eukaryotic RNA processing proteins.
Statistics
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PSSM-Id: 311582
View PSSM: pfam07713
Aligned: 80 rows
Threshold Bit Score: 97.6501
Threshold Setting Gi: 145347653
Created: 23-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121935601   40 FVPVWKQTVTDERGRRRLHGAFTGGFSAGYFNTVGSKEGWAPKTFVSSRANRN-KDqshgQTQRAEDFMDEEDLAQAAES 118
gi 74665865    35 GVPVWKQEARDERNRKRFHGAFTGGFSAGYFNTVGSKEGWQPKSWKSSRNENK-SV----HGMTIDDIMDEEDRADQ--- 106
gi 75151256    38 TLPAWKQEVTDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQSFTSSRQNRA-GA----RKQSISDFLDEDEKADM-EG 111
gi 255081887   36 ALPVHKQEATDAEGRRRFHGAFTGGFSAGYFNTVGSKEGWTPQQFTSSRANRA-K-----VTQTAEDFMDDDEREEMRA- 108
gi 168059373  115 qVAPWNQEVTDSEGRRRFHGAFSGGFSAGYYNTVGSKEGWAPTAFTSSRQSRA-DK----KSQAAYDFMDEDEKAEYDA- 188
gi 303285360   37 ALPVHKQEATDAEGRRRFHGAFTGGFSAGYYNTVGSKEGWAPSAFRSSAGDRAgAK----KTSTAFDFMDEDEREEL-AA 111
gi 302835151   39 tLPIWKQEATDEQGRKRFHGAFTGGFSAGYYNSVGSSEGFQPASFKSSRSSRQ-AV----VQQSVDDFLDEDER-EARSR 112
gi 255541870   38 TLVPWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQSFTSSRKNRA-EV----KQQNILNFLDDDERAEL-ED 111
gi 573947555   40 ALPAWKQEVRDEEGRRRFHGAFTGGFSAGYYNTVGTKEGWTPQTFTSSRKNRA-EV----KKQSVYSFLDEEDIKDM-GG 113
gi 302760881   41 QQPVWKQDARDSEGRRRFHGAFTGGFSAGYFNTVGSKDGWEPKTFKSSRGSRA-DM----RQHSAYDYMDDEERREM-DS 114

                  ....*....
gi 121935601  119 RQLETAQNF 127
gi 74665865   107 ---ELSKVY 112
gi 75151256   112 KSLSASSQF 120
gi 255081887  109 TALEARDDY 117
gi 168059373  189 KNLEVRSDF 197
gi 303285360  112 TALEARQDY 120
gi 302835151  113 TVLTVKNDY 121
gi 255541870  112 RSLGTSSQF 120
gi 573947555  114 NALETSQQY 122
gi 302760881  115 KQIGTAQEF 123
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