3NBX,4RH7


Conserved Protein Domain Family
AAA_5

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pfam07728: AAA_5 
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AAA domain (dynein-related subfamily)
This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Statistics
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PSSM-Id: 336785
View PSSM: pfam07728
Aligned: 35 rows
Threshold Bit Score: 104.285
Threshold Setting Gi: 81655266
Created: 26-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3NBX_X       43 SVFLLGPPGIAKSLIARRLKFAFq----NARAFEYLMTRFSTPEEVFGPLSIqalkD------EGRYERLTSGYLP---- 108
gi 81545782  90 ALLLLGVPGTAKTWVSEHLAAAVs----GDSTLLVQGTAGTPEEAIRYGWNY----ArllahgPGRDALVPSPVMRam-- 159
gi 81443136  77 ALLLYGLPGTAKSWVSEHIAAAIs----GDSTLIVQGTAGTGEEAIRYGWNY----ArllaegPSVGALVQTPVMKam-- 146
gi 81846456  82 GLMLIGEPGTAKSYLSELLAAAIs----GDSALTIQGSAGTTEDQVRYSWNY----AlmlsegPSEKSLVPAPIYEgm-- 151
gi 81550266  99 GLLLVGEPGTAKSMLSELLSAAVc----GTSGLVVQGTAGTTEDQLKYGWNY----AlllaqgPSRTALVPSPVLTam-- 168
gi 81721314  80 GLLLIGDPGTGKSWLAELLSAAIc----RNSTLVVQGTAGTTEDHIKYSWNV----SmviakgQSRESMIPSPIMTam-- 149
gi 81858985 403 PLLLTGAPGTGKTLLATLLAEVLc---gPGNFTLVTADARWTSSEVLGGLRV----Mpg---eGLRYSFVPGVVTRaaqr 472
gi 81584527 475 NLILQGPPGTGKTWLAKRLAFALmgqkdDSKVRAVQFHPNLSYEDFVRGWRP----Tg-----EGKLSLADGVFMEaika 545
gi 3915756  196 NIILQGPPGVGKTFVARRLAYLLtgekaPQRVNMVQFHQSYSYEDFIQGYRP----N------GVGFRRKDGIFYNfcqq 265
gi 74580838  20 NVLLVGAPGVGKTELALRAARFFt----CCEPEVEAGREDLSYEDLVWSYAV----Gp-----DGKLERRLGSLGRavkr 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3NBX_X      109 ---------EAEIVFLDEIWKAG-PAILNTLLTAINERQFR--NGAHVEKIPM------------RLLVAASNELP-EAD 163
gi 81545782 160 --------tEGATVRVEELTRIP-ADVQDSLITLLSEKTLPipELGEEVqav-----------rgFNLIATANDRD-RGV 218
gi 81443136 147 --------qEGKIGRIEELTRIG-SDVQDTLITILSEKTLPipELNTEVqai-----------rgFNIIATANNRD-KGV 205
gi 81846456 152 --------kLGKIVRFEELSRCP-GEIQDTLLSILSDRVLHipELNGEENVLfak--------qgFNIIATSNTRD-RGT 213
gi 81550266 169 --------aRGGIARVEEVTRCL-PEVQDALVSLLSERRIAvpELSGTDDALAhaa-------pgFNLIATANLRD-KGV 231
gi 81721314 150 --------eTGAIGRFEELTRST-SDVQDALISILSEKYVSvpELDSDSVVfaq---------pgFSIIATANSRD-RGV 210
gi 81858985 473 hresmqatgRPHALIIDEFNRAHqDEAFGRLLTLLDPAYRSqmPLVGVQDGAPedvf----lpadFVLIATMNDADvGRL 548
gi 81584527 546 a---skdpsSKFVVVIEEINRGNpAQIFGELLTLLEAGKRTpnEALELCYPDAdgkrrpvhipenLYVVGTMNIAD-RSL 621
gi 3915756  266 a---keqpeKKYIFIIDEINRANlSKVFGEVMMLMEHDKRGenWSVPLTYSENdeerf--yvpenVYIIGLMNTAD-RSL 339
gi 74580838  87 sweslakggGPCHYVLDEINRANiDVALGRVFTALDVEHRPrvKVFEEAGVEPpli------ptsLRVFATMNVVDrGQL 160
                       170
                ....*....|.
3NBX_X      164 SSL-EALYDRM 173
gi 81545782 219 NDLsSALRRRF 229
gi 81443136 206 NDLsSALKRRF 216
gi 81846456 214 NEMsSALKRRF 224
gi 81550266 232 SEMsAALKRRF 242
gi 81721314 211 NDLsSALKRRF 221
gi 81858985 549 HEIgSALQRRF 559
gi 81584527 622 ALVdLALRRRF 632
gi 3915756  340 AVVdYALRRRF 350
gi 74580838 161 FKLsFALLRRF 171
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