Conserved Protein Domain Family
AAA_5

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pfam07728: AAA_5 
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AAA domain (dynein-related subfamily)
This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Statistics
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PSSM-Id: 311595
View PSSM: pfam07728
Aligned: 33 rows
Threshold Bit Score: 100.83
Threshold Setting Gi: 81655266
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3NBX_X        43 SVFLLGPPGIAKSLIARRLKFAFq---NARAFEYLMTRFSTPEEVFGPLSI---------------QALKDEGRyerlts 104
gi 75337416 2029 GVIIVGPSGSGKSTLWELLEKAYerlgRKPIVYKMNPKAMPRQQLLGSMNmdtr--------ewsdGVLTAAARkvvke- 2099
gi 74892135  530 GVVLVGPSGCGKTTIWKTLKKAYekmgTQVKAYVMNPKSMPRSQLLGLMNndtr--------efteGVLTSSARevike- 600
gi 81545782   90 ALLLLGVPGTAKTWVSEHLAAAVs---GDSTLLVQGTAGTPEEAIRYGWNYarllahgpgrdalvpSPVMRAMT------ 160
gi 81443136   77 ALLLYGLPGTAKSWVSEHIAAAIs---GDSTLIVQGTAGTGEEAIRYGWNYarllaegpsvgalvqTPVMKAMQ------ 147
gi 81846456   82 GLMLIGEPGTAKSYLSELLAAAIs---GDSALTIQGSAGTTEDQVRYSWNYalmlsegpsekslvpAPIYEGMK------ 152
gi 81550266   99 GLLLVGEPGTAKSMLSELLSAAVc---GTSGLVVQGTAGTTEDQLKYGWNYalllaqgpsrtalvpSPVLTAMA------ 169
gi 81835416  138 GLMMVGEPGTAKSMLGELLAVAIs---GTGSLAVQGTAGTTEDQIKYGWNYamlldrgpvhealvpSPVMTAMR------ 208
gi 81721314   80 GLLLIGDPGTGKSWLAELLSAAIc---RNSTLVVQGTAGTTEDHIKYSWNVsmviakgqsresmipSPIMTAME------ 150
gi 74580838   20 NVLLVGAPGVGKTELALRAARFFt---CCEPEVEAGREDLSYEDLVWSYAVgpdgk-----lerrlGSLGRAVKrswesl 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3NBX_X       105 gylpEAEIVFLDEIWKAG-PAILNTLLTAINERQFR--NGAHVEKIPM--------RLLVAASNELP--EADSSLEALYD 171
gi 75337416 2100 pleqRSWIICDGDVD----PEWIESLNSVLDDNRLLtmPNGERIQFANn-------VNFIFECHSLE-----FASPATVS 2163
gi 74892135  601 ssdvISWIICDGDID----PEWIESLNSVLDDNHLLtlPTGERISFQDn-------VNFIFETNDLQ-----YASPATVS 664
gi 81545782  161 ----EGATVRVEELTRIP-ADVQDSLITLLSEKTLPipELGEEVqav-------rgFNLIATANDRDr-GVNDLSSALRR 227
gi 81443136  148 ----EGKIGRIEELTRIG-SDVQDTLITILSEKTLPipELNTEVqai-------rgFNIIATANNRDk-GVNDLSSALKR 214
gi 81846456  153 ----LGKIVRFEELSRCP-GEIQDTLLSILSDRVLHipELNGEENVLfak----qgFNIIATSNTRDr-GTNEMSSALKR 222
gi 81550266  170 ----RGGIARVEEVTRCL-PEVQDALVSLLSERRIAvpELSGTDDALAhaa---pgFNLIATANLRDk-GVSEMSAALKR 240
gi 81835416  209 ----DGKVVRFEEITRCL-PEVQDALISILSERRMMipEMDQAGDDNAnsvfaspgFSIIATANLRDr-GVSEMSAALKR 282
gi 81721314  151 ----TGAIGRFEELTRST-SDVQDALISILSEKYVSvpELDSDSVVfaq-----pgFSIIATANSRDr-GVNDLSSALKR 219
gi 74580838   92 akggGPCHYVLDEINRANiDVALGRVFTALDVEHRPrvKVFEEAGVEPpli--ptsLRVFATMNVVDrgQLFKLSFALLR 169

                 ..
3NBX_X       172 RM 173
gi 75337416 2164 RC 2165
gi 74892135  665 RM 666
gi 81545782  228 RF 229
gi 81443136  215 RF 216
gi 81846456  223 RF 224
gi 81550266  241 RF 242
gi 81835416  283 RF 284
gi 81721314  220 RF 221
gi 74580838  170 RF 171
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