Conserved Protein Domain Family
Abi_2

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pfam07751: Abi_2 
Abi-like protein
This family, found in various bacterial species, contains sequences that are similar to the Abi group of proteins, which are involved in bacteriophage resistance mediated by abortive infection in Lactococcus species. The proteins are thought to have helix-turn-helix motifs, found in many DNA-binding proteins, allowing them to perform their function.
Statistics
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PSSM-Id: 311615
View PSSM: pfam07751
Aligned: 199 rows
Threshold Bit Score: 48.7565
Threshold Setting Gi: 502950232
Created: 25-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81377089   46 ALETVSYYRLSSYLLPF-----K-----Qshn--aknPRQ-----F-KeNATFEQVWQLYQFDRELRLLVADAIEKIEVA 107
gi 524739495  31 VLLDVGYYRLGFYWFPYevdypQ-----Khh-----rTHE-----FtK-GADFDNAVKLYYFDFNLRNILLKALSRIEIA 94
gi 523984179  31 VLLDIGYYRLGFYWFPY-----EitypnKlk-----rNHC-----F-KkNTDFDNIVKLYYFDFNLRNILMKYINRIEIN 94
gi 504838366  32 MLLDIGYYRLGFYWYPF-----E-----Idk-----eHNF-----K-E-GTTFSNVISLYYLDVDLRNVLLKYLKRIEVN 89
gi 740769717  32 HLLDIGYYRLGFYWYPF-----Q-----Kns-----dHEF-----V-E-GTKFSDVIKLYYLDTDLRILLIKYTNRIEIN 89
gi 524174477  30 VLLDVGYYRFGSYLFPY-----EltypsKkd-----rTHK-----L-KaSTRFEDALDLYYFDSDLRMLLLRYLTRIEIN 93
gi 754991800  32 HLLDIGYYRLGFYWFPF-----E-----Kdn-----nSNDrkhcfV-P-DTKFSTIINLYYLDVDLRHLLIKHINRIEIN 94
gi 504837504  32 FLLDIGYYRLGFYWHHF-----E-----Ida-----dHNL-----A-L-GTKLSDVIALYYLDVDLRNILLKYLNRIEIN 89
gi 524668843  30 ILLDVGYYRLGFYSFPY-----E-----IqfpnlehrDHQ-----LkQ-GTTFKSVYDLYEFDTKLRRLLLNALDRIEVN 93
gi 503436300  52 aLLDIGYYRLGCYWFPF-----E-----EtppigkghSHK-----FkE-GTIFDYAIKLYYFDFDLRNILLRYISRIEVN 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81377089  108 FRAA------------------------------LTNVTSir--fNPFWYVErnyfkakaganrERDFfddyL-K----- 149
gi 524739495  95 FRTKviyfvsnkyknsptwfvdtnvvsnsqarsfW---------------------------------------E----- 130
gi 523984179  95 FRTY------------------------------Ltyhvsnkyv---------------------dsptwfvdpS----- 118
gi 504838366  90 FRTK------------------------------Iiyy---------------------------------tshK----- 101
gi 740769717  90 FRTK------------------------------Viyyvsnyyk---------------------esptwfadpA----- 113
gi 524174477  94 LRTY------------------------------I---------------------------------------Tyyvsn 104
gi 754991800  95 FRTK------------------------------Lvyyvsnkyk---------------------nspvwfadsK----- 118
gi 504837504  90 FRTK------------------------------Vvyy----------------------------------vsN----- 100
gi 524668843  94 IRTK------------------------------LIYHISlrykeDPCWFVNrkyvsskfvnnfEEQ-----VyA----- 133
gi 503436300 116 FRTT------------------------------VVYLVSnkykkIPCWYKDnnvvdssllksrTYKN----VlK----- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81377089  150 -------------TIK--------------------------------TISTN-----------K-----------QELF 162
gi 524739495 131 -------------KVY--------------------------------KQILD-----------K-----------TPVI 143
gi 523984179 119 -------------IVK--------------------------------QDYIQ-----------SfninvynenfkKNPI 142
gi 504838366 102 -------------YIE--------------------------------DPIWY-----------S-----------NPKI 114
gi 740769717 114 -------------IVN--------------------------------KEVIDfvdrnynqqfiK-----------NNKP 137
gi 524174477 105 vykdnpywfvnegIMD--------------------------------AEFVN-----------SfdisiyteqfkKHPV 141
gi 754991800 119 -------------VMK--------------------------------RNFIN-----------S-----------FDDY 131
gi 504837504 101 -------------KFKhspswfadktivkdsfiestpwkrsmlsrvytKEFIH-----------N-----------NKTL 145
gi 524668843 134 -------------PLR--------------------------------KNP----------------------------I 140
gi 503436300 157 -------------NIR--------------------------------QEP----------------------------L 163
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81377089  163 ------------------------I-----------QHYHKN-YdkpY--FP--PIWMMVEALSFGVCSKMF-NNIQ-Sk 200
gi 524739495 144 ------------------------A-----------LHHRHHiNd--K--FA--PAWKTLEFMTLGEVVRLY-KAIK-De 180
gi 523984179 143 ------------------------I-----------KTHHTK-HindK--YA--PAWKTIEFMTLGAVINLF-NAIK-De 180
gi 504838366 115 maywfiskldvnlytdkfkeenkqI-----------KLHHIN-Yr--N--DIyaPTWKTFEFLTFGAIVTIF-NALK-Se 176
gi 740769717 138 ------------------------I-----------KEHHLN-HindK--YA--PAWKTLEFLTFGIVFNIY-RNIR-Nq 175
gi 524174477 142 ------------------------I-----------ADHHKK-Yp--GekYA--PAWKTVEHMTFGAVYQLFlSITD-K- 179
gi 754991800 132 ------------------------YndnfrrnkvieNHHRNNiNd--K--YA--PAWKTLEHFTFGTNFLIY-KSLLeN- 179
gi 504837504 146 ------------------------K-----------KHHLNNpLd--T--YA--PAWKTLEFFTFGVLLNLF-KNIR-N- 181
gi 524668843 141 ------------------------I-----------EHHHAN-Ha-gI--YA--PAWKAIEFMTLGNIIRLY-DALK-Et 177
gi 503436300 164 ------------------------I-----------NRHYTK-Yk--T--DA--PEWKELEFMPFGTIINLY-DNLR-Dq 199
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 81377089  201 DV-RNEIAsflgq-httvIESWIKSLTYTRNLCAHHSRLW 238
gi 524739495 181 KL-KLQIAnafgiktlptFDNYLNLIKDVRNACAHGNVLY 219
gi 523984179 181 KT-KTEICkhyginkvvvFNSYINLVRKIRNQCAHGNVLY 219
gi 504838366 177 EL-KKEISklyglnnlntFINFIHTIKFIRNICAHAGVLY 215
gi 740769717 176 EL-KEQIAnefgvvsldkFYNLFKVIIDIRNSCAHGDVLY 214
gi 524174477 180 DV-QSAISkhynvdkltiFTSYFNAIRYLRNQCAHGDVLF 218
gi 754991800 180 DM-KKIISncygindvdkFIKIIQMIVFVRNYCAHSGVMF 218
gi 504837504 182 EDiKKRVTeslgvlnsdkFENLMSTVVLLRNICSHGDVLY 221
gi 524668843 178 DA-KNLITneygc-srgvFYNYLETIRVLRNKCAHGGCLY 215
gi 503436300 200 HL-RCDIAkvygitnpsnFSNYINTVRHLRNCCAHGKVLF 238
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