Conserved Protein Domain Family
Pilin_N

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pfam07790: Pilin_N 
Archaeal Type IV pilin, N-terminal
This entry represents the N-terminal domain of archaeal pilins, which play important roles in surface adhesion and twitching motility. This domain contains an conserved N- terminal hydrophobic motif.
Statistics
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PSSM-Id: 311640
View PSSM: pfam07790
Aligned: 37 rows
Threshold Bit Score: 38.3148
Threshold Setting Gi: 121684303
Created: 23-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121731638    4 EAVSPVIGVLLMLTLTLIIAAIVNSYAGGLv---DTEPKAPSATLQVK---YSQSGG-----MEIRHVSGDPIPTSSVKV 72
gi 121684303    9 NAVTPVLGAVLLVLLTVVLAGAVAVIVISNgsalSLSSSTPMAMIEVSd-vVGYASSyknnfVSLEHKGGDPLDLDSTFI 87
gi 74534763    18 QAVSEVMGQVLMLAVVMLAFSSIAVVIFSDev-nINPPHTPKADLQER---IDTGANt----VKIFHKGGEAIDLEDAKI 89
gi 121686650   15 DGVSVVVGEIMMTAIVVIAVSFIAASVLSy----EGPSDVPNVDVIGW---VDVGADt----VNFRHTGGETVDGQDIRL 83
gi 74534756    27 IGVSSVMGEVLIAGIIVIAFGSLFVIMTYI----DKPVDSTRLLAEEW---IDAPSDt----IFLRHAGGEPIDTKDLKI 95
gi 74534739    12 SAVSDVVGEVLMTTIAVILISSIAVFIFSY----DGAADVPRTHVKEW---TDSRINt----IYIEHNGGEFIETEALEI 80
gi 74534735    13 AAVSEVTGVVLLTSVVIIMLSILSISIFSL----DGPDDIPHTRLQEW---INKSADt----IYLKHSGGEFLDTEKCEI 81
gi 121721471    5 IAVSEVIGAVLLIGVVMLSMAIIGVIMLST----PPPEKTPKASLTSYcvkCDLDGNy---eIILYHGGGESFSQNQVKF 77
gi 154000475   11 QAVSEVVGEMLMIALVLILAAVFTSQLPNY----LPSERSPSVTIMMS---DGTYGPg---nITFWHKGGDWVKVNALKV 80
gi 851012380   10 SAVSEIIGTVLLISIVVLAASIIAVAVFSQ----PQAQKIPAVSA------LISNQSq---iVYIKHNGGDPLQNGTYRI 76
                          90
                  ....*....|
gi 121731638   73 I---VRPSET 79
gi 121684303   88 V---LSGEGS 94
gi 74534763    90 V---LNINGQ 96
gi 121686650   84 N---LNLNGS 90
gi 74534756    96 N---VQINGT 102
gi 74534739    81 V---ININGN 87
gi 74534735    82 V---LNVNGE 88
gi 121721471   78 IlylEDGSSK 87
gi 154000475   81 I---ISDPSA 87
gi 851012380   77 L---VDGADV 83
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