Conserved Protein Domain Family
Nod_GRP

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pfam07806: Nod_GRP 
Nodule-specific GRP repeat
The region featured in this family is found repeated in a number of plant proteins, some of which are expressed specifically in nodules formed during symbiotic interactions with certain bacterial species. Some of these proteins are also termed glycine-rich proteins (GRPs), due to the presence of a glycine-rich C-terminal region in their structures. Bacterial infection is required for the induction of nodule-specific GRP genes, and it is thought that nodule-specific GRPs may play non-redundant roles required at specific stages of nodule development. Members of this group of proteins may be cytosolic, whereas others are thought to be membrane-associated.
Statistics
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PSSM-Id: 116420
View PSSM: pfam07806
Aligned: 10 rows
Threshold Bit Score: 35.5728
Threshold Setting Gi: 75159278
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 75159278  75 GVTKESKTKIGIDSWRDWGGSFWgYGEENNGGGEEEGG 112
gi 75159278 115 GVTRESKTKIGTDGWRDWGGSFWeDGQENNGGGNKNSG 152
gi 75202631 107 GVTREFKTXIGTDGWRDWGGSFWeDGQKNHGGGDTEGG 144
gi 75163543  34 GATEEFKTKNEFDEWREWEGWNWg-GRQGNGGGEKEGR 70
gi 75159278  33 GVAKVSKTKVGIDGWRDWGGSFWeDGQENNGGSDKEGG 70
gi 75097523  25 GVTKESKTKIVIDGWRDWGGSFPdVEKENNGRGDKEGG 62
gi 75097523  71 GEVHESVTE----GWRDWGGAFPnVEKENNGRGDKEGG 104
gi 75159278 161 GEVHESVTE----GWRDWGGSFWdDDKENIGGKNKEGA 194
gi 75096992  28 GAIEETKTKYGIDSWRDWGGSFWgDEEVDTGGGDKDGG 65
gi 75096992  69 GEKGKKESKNGKDDWRDWGGSFWgDEEGNGGERGKKGG 106
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