Conserved Protein Domain Family
DUF1642

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pfam07852: DUF1642 
Protein of unknown function (DUF1642)
The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.
Statistics
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PSSM-Id: 311688
View PSSM: pfam07852
Aligned: 46 rows
Threshold Bit Score: 71.6579
Threshold Setting Gi: 75091724
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81437479    83 KKSIEVSKEFDKWVQKSKeaHIDykswciwqINKMGWDHWLEDPITDeelltgKGLEW-T--KeVEENRELHTRAILDGY 159
gi 75092872    30 PKPV-VPKYVADYIEKVK--SDGtf----svVGAIL------EAPDG------DVQDWlf-----aESVDTFVQAWVNGY 85
gi 123458411   56 APVLKVPQCVADWYEKYK--CALey----siWKYIRNWDYHEED---------GFFNFmN--DnDNESIKTLIKMQN-GY 117
gi 157325176   56 PKQLVVPRYVADWFEAHR--YNLen----niWEYIREWNKQDCY--S------EFFKF-MgrN-SGKPVETLIKM-QDGY 118
gi 910765427   39 PKPVKVPQCVAEYIEFKK--KNnf-----hvYGAMRVI---EDHYDK------KVPDW-F--Y--ENNIEKFCLAWLDGY 97
gi 1006353680 102 REKVIVPQCVAEYIEFKK---KNnf----hvYGAMRVIE---DHYDK------KVPDWfy-----eNNIEKFCLAWLDGY 160
gi 994576488   28 REKVIVPQCVAEYIEFKK---KNnf----hvYGAMRVIE---DHYDK------KVPDWfy-----eNNIEKFCLAWLDGY 86
gi 446963907   40 PQPVKVPQFVADWIRKCKmfKHFav----slSFALQPIVWEENGLSH------ECIEWlm----daNNQELFALAWLNGY 105
gi 895789454    8 PQKVKIPQFVADWIEVCK--EHLtt----slYTAMTPNFMKENNQSF------DLILWik----kaSNQDLFARAWLDGY 71
gi 987208610   39 PEKVKVPRFVAEWIEEAR---KAck----dvVEL-----FEFDFTND------EVRKWfm----qeRPFDLVARAWLDGY 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81437479   160 TVKKEPMYEIPLPYAINAtgKQQYLSYNTeKNRFVCTAKSDKLK---------------QRFTETELkEEVP--GFYREL 222
gi 75092872    86 NVEKEPRYKVTFKGLNIN-----------------KHLCCNWTRenwylwcekesntryTSHTRKEL-EE-A--DFGWVF 144
gi 123458411  118 EVEKEPLYWVQL--------------IEGaSGYLNVRNDGIQFInssgq-----taelkTRFTEKEI-KAMDkgDAYWQF 177
gi 157325176  119 EVEKEQLYYIKLPKPFMY-----LRRSKLyPTSQNIed--------------------aSMYSKKEI-KEMD--EGYLHF 170
gi 910765427   98 EVEEEKRYLVTLKNRQPL--VKSQSGSTLyFSQDITar--------------------nYKGTQKEL-EE-A--KFGWVF 151
gi 1006353680 161 EVEKEKRYLVKVKGVHFT-----------------NYLISGNRKdiwffhsayepehqiIAHTRKEL-EE-A--GFGWVF 219
gi 994576488   87 EVEKEKRYFVKIKGNIKE-----------------NMLVYGELLkryfftksfslddviYSHTRKEL-ED-A--KFGWVF 145
gi 446963907  106 EVEKEKRYFVKIKGNIKE-----------------NMLVYGELLkryfftksfslddviYSHTRKEL-ED-A--NFGWVF 164
gi 895789454   72 EVEKEKRYLVKIKGNIKE-----------------NMLVYGELLeryfftksfslddaiYSHTRKEL-EN-A--KIGWVF 130
gi 987208610   97 EVEEEKRYLVTLKNR--------------------QPLVKSQSGstlyfsq--ditarnYKGTQKEL-ED-A--NFGWVF 150

                  ....*...
gi 81437479   223 A---VKVD 227
gi 75092872   145 DcegIEIE 152
gi 123458411  178 A---VPVE 182
gi 157325176  171 A---IPIE 175
gi 910765427  152 D---CEgi 156
gi 1006353680 220 DcpgIEIE 227
gi 994576488  146 DcpgIEIE 153
gi 446963907  165 DcegIDIE 172
gi 895789454  131 DcegFEIE 138
gi 987208610  151 DcegIEIE 158
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