Conserved Protein Domain Family
SRR1

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pfam07985: SRR1 
SRR1
SRR1 proteins are signalling proteins involved in regulating the circadian clock in Arabidopsis.
Statistics
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PSSM-Id: 311786
View PSSM: pfam07985
Aligned: 176 rows
Threshold Bit Score: 30.0936
Threshold Setting Gi: 302794240
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 31340425    73 CIILGLGRIH-TLTASLQLSLFFEIMKIFN-LQPRF--CSFYDPAFLKDDVEFLENK 125
gi 1031698834  52 ILCYGLGNFFeSIQSKYQLGLLLTIKNEFK-VK--N--CYVYDPKFTDAERSHLTEi 103
gi 167521275   79 aVCLCLGNFAtSRTGRRQLAFFLALIQDLG-LAPKN--VFVYDPCFSCLEQTFLAAq 132
gi 1005970568 117 VVSYGIGRFSaSKESLYQLSLLFILKNEKI-VTAEE--WLIYDPVFTDHEKKFLSAn 170
gi 684409213  157 VLCLGLGNPAvDRASLRQLAVLDLLIERDPrLTRSR--TQLYDPVFRSVSRQFIHHL 211
gi 303280579  113 VVVLGLGSPSaSLVSRYQLALALALAERFD-VPRAS--VALYDPAFSPVDVALLTRv 166
gi 642938631    1 ------------MISRYQLGFLLCLKDLFQ-IE-----VKIYDPVFTEADHWLLRQF 39
gi 674568730  114 lLCLGLGNPAvDSASLRQLAFLAALVQTSD-GIFSPgkTFVYDPVLKTTSRNFIRQL 169
gi 674588752  125 fLCLGLGNPAlYASSLNQLALLTALVRLSE-GAFLPekTFIYDPLMKKVARDFIRGL 180
gi 360043241   84 VVCLGLGNPAvHHASLRQLVVLDLLLQLDP-RMERSr-THLYDPVFKSVARALIRKL 138
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