Conserved Protein Domain Family
NAD_binding_4

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pfam07993: NAD_binding_4 
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Male sterility protein
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included.
Statistics
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PSSM-Id: 311793
View PSSM: pfam07993
Aligned: 80 rows
Threshold Bit Score: 167.78
Threshold Setting Gi: 122180169
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4U5Q_B         78 LTGATGFLGRYLVLELL---RRLD-VdgRLICLVR-AESDE----DARRRLEKTFDSGDPELLRhfkelaADRLEVVAGD 148
gi 442570205  972 LTGVTGFLGCHILADLLnrsRKPYdI--TVYAHVR-ASDES----SALQRIKSVCTAYGLWKNAy-----APRIKVVLGN 1039
gi 52783116   958 VTGVTGFLGSFILSDILn--RTVTgVnfKIFAHVR-AADET----SGLDRIRKAGTVYGTWKEEy-----ANSLQVVIGD 1025
gi 126643     975 VTGVTGFLGSYILADLLg--RSPKnYsfKVFAHVR-AKDEE----AAFARLQKAGITYGTWNEKf-----ASNIKVVLGD 1042
gi 74607358   968 VTGVTGFLGSYILADLLn--RPTSsYniKVFAHVR-AKTEA----AGFNRLKQAGITYGTWSDSf-----INRIEVVLGD 1035
gi 74684358  1009 LTGATGYLGAFILKDLL---SRRVr---KVICLVR-AKSAD----QGLQRLRDSGEGRGVWDEEwv---kQDRIEAVIGD 1074
1_pfamImport    1 LTGATGFLGTYLLHELL---RDPEr---KVTCLVR-GD-------DGMSRLRQAFRQYDLPQSVl-----TERVTIVTGE 61
3_pfamImport    1 LTGVTGFLGAFLLRDLL---ENTSa---QILCMVRfADSSQddipAGIARIRRNMLDFGLWSDNi-----MERVEILPGN 69
gi 81538830  1796 LTGASGFLGAFLLRDLM---RTTTa---RVHCLVR-GADEA----AAMERLKANAEWYRVWDDId-----PERVSVVLGD 1859
gi 585251     139 LTGGTGFLGAFLIRELL---QQTQa---DVYCLVR-AADAQ----AGKAKIQTNLEGYAIWQEEy-----ESRIIPVVGD 202
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4U5Q_B        149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVN-AFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTaDVGAAIEPSAFT 227
gi 442570205 1040 LAEKQFGLPKKAWHDLQEGIDVIIHNAALVHwVYPYSKLREANVLSTVNVLNLAAAGKAKYFTFVSStSALDTKHYLELS 1119
gi 52783116  1026 LSKKNFGLTDDKWSHLSETIDIIIHNGALVHwVYPYSKLRNANVVSTINIMNLASEGKPKLFNFVSStSVLDTNHYFELS 1105
gi 126643    1043 LSKSQFGLSDEKWMDLANTVDIIIHNGALVHwVYPYAKLRDPNVISTINVMSLAAVGKPKFFDFVSStSTLDTEYYFNLS 1122
gi 74607358  1036 LSKEKFGLPEGTWSNLVNEIDVIIHNGALVHwVYPYSKLRDPNVVATVNVMSLAASGKAKYFTFVSStSTIDTEHYFSLS 1115
gi 74684358  1075 LAEEKFGLSQAEWDRVAEQTDAVLHNGAIVHwVYPYPKLRAANVISTVTALQLCAQHHSKQFSFISStAVLDAEAFVAKA 1154
1_pfamImport   62 LSKPGLGLAAADYDNIVRNADCIFHNGAEVHhLHRYERLRETNVLGIREILQLACAGEGRHVHYISTlSALTPRRGSGGD 141
3_pfamImport   70 LSRKRFGLPPDTFKELAERTDVILHAAATVNlVYPYAALQKPNVGGTREILRLAA-QGGATVQYISTnGVLLPKPGREGW 148
gi 81538830  1860 LAEPRLGLDEESFDALARTVDVVYHNGARVHwLLPYETLKASNVTGTEEVLRLAARHRTVPVHYVSTvGVFDGVREPGVP 1939
gi 585251     203 LAEPLLGLSSTQFQALAAEIDTIYHSGALLNyVFPYSALKAANVLGTQEVLRLACQIKVKPVHYVSSvAVFESPVYAGKV 282
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4U5Q_B        228 EDADI------RVISPTRTVDGGWAGGYGTSKWAGEVLLREANdlcALPVAVFRCGMILADTSYaGQLNMSDwVTRMVLS 301
gi 442570205 1120 NAAIEsggsgvPEDDDLMGGSLGLKGGYGQSKWAAEFIIKRAGe-rGLRGCILRPGYVTGSPST-GASNADDfLLRFLRG 1197
gi 52783116  1106 DKLQQsgkegiPESDDLMGSSLGLTSGYGQSKWAAEHIIRAAGk-rGLRGSIIRPGYVTGASYN-GSSNTDDfLLRFLKS 1183
gi 126643    1123 DKLVSegkpgiLESDDLMNSASGLTGGYGQSKWAAEYIIRRAGe-rGLRGCIVRPGYVTGASAN-GSSNTDDfLLRFLKG 1200
gi 74607358  1116 DKLVSegksgiLEADDLSGSAVGLTSGYGQSKWAAEYIIRRAGe-rGLRGCIVRPGYVTGASSN-GSSNTDDfLLRFLKG 1193
gi 74684358  1155 DEVVQaggkglLENDDLEAGRTGLNAGYGQSKWVAEKIIMEAGk-kGLSGWILRPGYVLGHSQT-AVTNTDDfIWRMVKG 1232
1_pfamImport  142 PRPV--------CELESVEGFVPPAGGYNRSKWVAEHLVNEAGr-rGLPVTIYRPGAISGDSVT-GAFNGSDiLCRLVQA 211
3_pfamImport  149 PE----------DAMLEVDDVVKLADGYGQTKWVAEQLALEAGr-rGVPIKIHRIGTISGHSET-GAANAWDlLTALIVE 216
gi 81538830  1940 L-----------RVTDPTGPAESLPSGYLRSKWVAEQVIEVARd-rGLPVSVYRVDVISGDRVN-GACQTRDfVWLTLKG 2006
gi 585251     283 V-----------KESDDFSHWEGIFLGYSQTKWVAEKLVKIAGd-rGLPVTIHRPPLIGGDSET-GIGNTHDfINLMVKG 349
                         250       260       270
                  ....*....|....*....|....*....|....*..
4U5Q_B        302 LMATGIAPRSFYEpdsegnrqrahFDGLPVTFVAEAI 338
gi 442570205 1198 CVQLGKIPDIEGT-----------VNMVPVDYVARLA 1223
gi 52783116  1184 AVQLGKIPDINNT-----------VNMVPVDQVARVV 1209
gi 126643    1201 SVQLGKIPDIENS-----------VNMVPVDHVARVV 1226
gi 74607358  1194 VVQLGQIPNISNT-----------VNMVPVDHVARVV 1219
gi 74684358  1233 CVQLGLIPEINNA-----------IICCPVDHVARls 1258
1_pfamImport  212 YLYTGTAPEGERL-----------LDMLPVDHVARAI 237
3_pfamImport  217 SIRIGHYPEVNGWr----------AEMTPVDFVSKAV 243
gi 81538830  2007 LIQARSVPKGTEGr----------FHLLPVDYVSAAI 2033
gi 585251     350 CLQMGCFPDVEYM-----------LDMSPVDYVSKAI 375
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