Conserved Protein Domain Family
Antimicrobial_4

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pfam08024: Antimicrobial_4 
Ant antimicrobial peptide
This family consists of the ponericin family of antimicrobial peptides isolated from predatory ant Pachycondyla goeldii. The ponericin peptides may adopt amphipathic alpha-helical structure in polar environments. In the ant colony, these peptides exhibit a defensive role against microbial pathogens arising from prey introduction and/or ingestion.
Statistics
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PSSM-Id: 116634
View PSSM: pfam08024
Aligned: 5 rows
Threshold Bit Score: 24.6677
Threshold Setting Gi: 18202407
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                       10        20
               ....*....|....*....|....
gi 18202407  2 LGSALKIGAKLLPSVVGLFqKKKK 25
gi 25453144  2 WGALAKGALKLIPSLFSSF-SKKD 24
gi 18202410  2 WGALIKGAAKLIPSVVGLF-KKKQ 24
gi 18202408  3 WGTLAKIGIKAVPRVISMLkKKKQ 26
gi 18202409  3 WGTALKWGVKLLPKLVGMAqTKKQ 26
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